EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM085-14931

Organism

Mus musculus

Tissue/cell

Kidney

Coordinate

chr19:9121290-9122820

Target genes

Number: 32
Name	Ensembl ID

Slc22a30	ENSMUSG00000052562
Slc22a8	ENSMUSG00000063796
Slc22a6	ENSMUSG00000024650
Slc3a2	ENSMUSG00000010095
Snhg1	ENSMUSG00000090867
Stx5a	ENSMUSG00000010110
Nxf1	ENSMUSG00000010097
Tmem223	ENSMUSG00000075043
Tmem179b	ENSMUSG00000079437
Taf6l	ENSMUSG00000003680
Polr2g	ENSMUSG00000071662
Zbtb3	ENSMUSG00000071661
Ttc9c	ENSMUSG00000071660
Hnrnpul2	ENSMUSG00000071659
Bscl2	ENSMUSG00000071657
Gng3	ENSMUSG00000071658
Lrrn4cl	ENSMUSG00000071656
Ubxn1	ENSMUSG00000071655
AI462493	ENSMUSG00000071654
SNORA57	ENSMUSG00000070167
1810009A15Rik	ENSMUSG00000071653
Ints5	ENSMUSG00000071652
Ganab	ENSMUSG00000071650
B3gat3	ENSMUSG00000071649
Rom1	ENSMUSG00000071648
Eml3	ENSMUSG00000071647
Mta2	ENSMUSG00000071646
Tut1	ENSMUSG00000071645
Eef1g	ENSMUSG00000071644
Ahnak	ENSMUSG00000069833
Scgb1a1	ENSMUSG00000024653
Asrgl1	ENSMUSG00000024654

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GATA5	MA0766.2	chr19:9122305-9122315	TCCTTATCTG	-	6.02
HNF4G	MA0484.1	chr19:9121884-9121899	TGAGGACAAAGGTCA	+	6.16
Nr2f6	MA0677.1	chr19:9121885-9121899	GAGGACAAAGGTCA	+	6.35
RXRB	MA0855.1	chr19:9121885-9121899	GAGGACAAAGGTCA	+	6.19
Rxra	MA0512.2	chr19:9121885-9121899	GAGGACAAAGGTCA	+	6.19

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

mSE_01393	chr19:9112488-9168794	Th_Cells
mSE_02884	chr19:9121968-9154477	HFSCs
mSE_11317	chr19:9120870-9124000	Placenta

Enhancer Sequence

TCTCTGTGGG TGAAAGCACT TGACACACAG GCCTGACAAC CTGAGTTGGA TACCTAAAGG 60
CAAAGGTGTG GAAAAGTGGA AAGAGAGAAA AATCTCTCCT TCTCTCAATT AAAAAAAAAA 120
AAAAGCTTTA ACATGTAGGC AGAGGGTTGG TTTGATGAGG TAGGATATGG TCTTTGAAGG 180
GTCTTGAAAG TGAATCCCTG TAGGTTTGGG GCTGCAGTGT AGGTCACAGG GTAGGAAGTG 240
TGAGGGTAGG AAGGCAGCGC TCGGGCTGTT GCCGAAGGAA GGACAGGAGA AGCTCAGTCA 300
CCTTTCTTCC ATTTAGTTTA GCGCCAGCTG CTAGTTTCCT GTGTAGTTCG AGTCTCCTCC 360
GGCATGGAAG ACATCTAAAA GGCTTCGGGG AAGGTGGAGG TCTTCAGTCA CTGGTGTTTC 420
TCTCAGGGGG CTGCGTACAA GGCCAGGCAA GGAGCCTTTC TTTCTCCACA CTATGTGTTC 480
TGACCTGGTT GGGCCACAAA GCAACAGCTC CAGGAAGAAT TTTTGTTTTT TACATTGCAA 540
CAGAATTCCT TGCATAGCAG AGCTCAGGAA AAAAAAAAAA AAAAAAGCCC TATTTGAGGA 600
CAAAGGTCAG GGCTTCAGAG TTCAGGCCCA TTTGGAGAGA ACCCTTCTTT GCTAATCCCA 660
AATTTGCCTG ACAAGCCTCT GTGCTGATGT ATGTGGAATG AACTCTGTCA AGACCAGTGA 720
TTTAATCTAG GCTTCAAGTT ACATTTTCTT GCACCTTGAA GCCATCACCC ACAGACGGGC 780
TTTGACGGCA GGAGAGGTAA GATTGGCAGA TGCCCGTCCC AGGACTGCCG GTGCTGGGCT 840
AAGCCTGCTT TCCCCAGCAA GCCCAGGCAG CACTGGCCTC CTTGGCGGGG AGTGGGGTCT 900
GGGTTTCCTT GACTTGCCTG CTGCTCTCCT GCTCAGGACT GTCAATGGTG GGAGGCTGGA 960
GGAGGGAGGG CCCTCCTACA AACCTGACAC AATCAAGCCA CAAGGAGCAC CTGGCTCCTT 1020
ATCTGCCTCT CCCTACATTC CAGCTCCTTG GAACCAGCCA AGCTCTTCTC TGAAGTCCAA 1080
AGGAGGTTGA GATACCCATA TTCCCCAAAG CCACTTTGGA CTGTTTCCGA GAATAACTTT 1140
GTAGCACAGG AGGCAAAGGG CAGGGTTGCA CCCAAGAACC CATCACCCAA TTGTCCAGTC 1200
TGATTTGGAA AGGCAGTTTT GATTTTGTTC CTTATCCCCA GTGGGGATTC ACACACAGTG 1260
GAAGGAGGCA GTGGAAGGCA CTAGGTCACA GAATAGAGGC CTGCTCCCTG TCCAGGCAGT 1320
TCCCATCTGC ATGGTGACAG GCTCTTAGAG AAATAGCTTA ATAAAAGAGT TCTAAGCAGC 1380
CTGGCAACCT TCCAACCTTC CTTGTACCAG AGACGAAAAT GTTGTCCAGA CAAAATGTTT 1440
AGGGAATTTC TTAGCACATT CACCACTTGT AGACCCCAAA CTATACAAGT TGTGGAACTC 1500
TTGAGAAAGA GAAAAAAAAT AAAGCCCTTA 1530