EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM085-14866

Organism

Mus musculus

Tissue/cell

Kidney

Coordinate

chr19:7533200-7534590

Target genes

Number: 25
Name	Ensembl ID

Prdx5	ENSMUSG00000024953
Esrra	ENSMUSG00000024955
Fkbp2	ENSMUSG00000056629
Vegfb	ENSMUSG00000024962
Dnajc4	ENSMUSG00000024963
Nudt22	ENSMUSG00000037349
Trpt1	ENSMUSG00000047656
Stip1	ENSMUSG00000024966
Macrod1	ENSMUSG00000036278
Flrt1	ENSMUSG00000047787
Otub1	ENSMUSG00000024767
Cox8a	ENSMUSG00000035885
Naa40	ENSMUSG00000024764
Rcor2	ENSMUSG00000024968
Gm17227	ENSMUSG00000091558
Mark2	ENSMUSG00000024969
AI846148	ENSMUSG00000024970
Rab11b	ENSMUSG00000002290
2700081O15Rik	ENSMUSG00000053080
Rtn3	ENSMUSG00000024758
Atl3	ENSMUSG00000024759
Pla2g16	ENSMUSG00000060675
Lgals12	ENSMUSG00000024972
Slc22a19	ENSMUSG00000024757
Slc22a26	ENSMUSG00000053303

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr19:7534272-7534293	AAAAAGAAAAAGAAACCACAA	-	6.81
ONECUT2	MA0756.1	chr19:7534227-7534241	ACAAAATCAATAAA	+	6.08
ONECUT3	MA0757.1	chr19:7534227-7534241	ACAAAATCAATAAA	+	6.51

Enhancer Sequence

TTAACCCCCC CCATAATAAA GGGGTGATGG TACTGGGAGA TTTGGGGAGT TTTTCCATTC 60
TTTTTTTTGG GGGGGGGTAG TTATTCTATA GGAACAATGT AATCTATACA ATAGAGCTTG 120
CTGTAATGTC TTCCTTTGTG AGTTGAACAA TTCAGAACAC ACTGGCTCTA CAGATCCCCT 180
GTTACAGTCC TCACAATCTG AGAAGGAAGA GTTAGCAGCC TGACTCAAGT TGTTCTTGAT 240
TTAGAAAGGC AGCAGGTCTT TCTTGAGTCT GAAAATCATA CTAACATCAG ATGTTAATCA 300
TCAAACATCA GATGTTTCCA AATGCCATAT AAAAGAGTTG TTGCCTCATT AGCCAGGAGC 360
AGTGGTGCAT GCCTTTAGCA CACTGGGTGG GGTTGGGGCA CCAGAGGGAG GAAGATCTCT 420
CTCTGTCAGT GAGAGGCTAG CCTGGTTTAC ATAGTAAGTT CCAGGACAGC CAGGGCTATG 480
TAGAGAGACC CTGTCTCCAA ATAGAAAAAC AGGAGTTGTT TTATTCTGTC ACATCAATAA 540
ATTTTATGTC ACAGGATCTG AGCTTTAGAA CAGTAAAGCT GTAACCTAGG CAGTGGGAAC 600
CCCTTCAAGG ATGGGGTGGG TGGTCATAGA ATTAAGTCTG ATTATAAAAC TGGCCGAAAA 660
AAATGATGAC ATAGATGTCG TAAACTGTGT ATACCCATCA CTACATACCT GAGATCCTCA 720
GCATGAAAGA GGTGTAAGGT AAATGAATCC CTGTACCTAG GTTAAAATGC TGAATCTTTC 780
CCAACAGGAA TGTAACCCTG AGGCAAGCAA AACTGACCTT ACAAAGACAG CATAGCCTAC 840
CATTTTATAG ACATGGAATT TCAGATGATT CAGAAGAAAG ACTCGCAGAT GAGACTGTCA 900
GCAAAGTAAA TTAATTATGT CTATCACATG CCAGACACCA TTTCAGAAAC TGGATTTAAT 960
GCAGTAAATG AAACAGAAAA AAACCTGTTC TTTATGGAGC TAATACAGGG AAGAAAGACC 1020
AAAATACACA AAATCAATAA ACAAATAAAA TAATGGAACT GATATATTCC ATAAAAAGAA 1080
AAAGAAACCA CAATAGAAAC GATGATCACA AAATATGTAA TTACTAGGAT AACAGTGAGG 1140
ACACTGTGTG CTTTGGTAGG AAGTGAACTT GCCAGTTTCT TATGCCCTGT TTTCTCTCCA 1200
ATTTCCCCTG AACCCTGAGC ACTCCAATAG TTTTGAACTG GGTATAGAAC AATCTAAGGC 1260
AAAACTGTGA GGTTAGGCTA GAAGTCTTGC TGTCAGAATG CTAGTGGGTT TTCTTATGAG 1320
CATCATGACT ACCTGGCAGA CTGAAAATTT TTTATTAAAT ACTTTTTTTG ATGCAAAGTC 1380
TTCTGCGTTC 1390