EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM085-14663

Organism

Mus musculus

Tissue/cell

Kidney

Coordinate

chr19:4597420-4598330

Target genes

Number: 32
Name	Ensembl ID

Acy3	ENSMUSG00000024866
Gstp1	ENSMUSG00000060803
Gstp2	ENSMUSG00000038155
Cdk2ap2	ENSMUSG00000024856
Aip	ENSMUSG00000024847
Coro1b	ENSMUSG00000024835
Ppp1ca	ENSMUSG00000040385
Pold4	ENSMUSG00000024854
Ssh3	ENSMUSG00000034616
Adrbk1	ENSMUSG00000024858
Kdm2a	ENSMUSG00000054611
A930001C03Rik	ENSMUSG00000087132
Rhod	ENSMUSG00000041845
Syt12	ENSMUSG00000049303
2010003K11Rik	ENSMUSG00000042041
Pcx	ENSMUSG00000024892
Lrfn4	ENSMUSG00000045045
Rce1	ENSMUSG00000024889
Gm960	ENSMUSG00000071691
Spnb3	ENSMUSG00000067889
Rbm4b	ENSMUSG00000033760
Rbm14	ENSMUSG00000006456
Ccs	ENSMUSG00000034108
Ctsf	ENSMUSG00000083282
Actn3	ENSMUSG00000006457
Zdhhc24	ENSMUSG00000006463
Bbs1	ENSMUSG00000006464
Dpp3	ENSMUSG00000063904
Mrpl11	ENSMUSG00000024902
B3gnt1	ENSMUSG00000047379
Cd248	ENSMUSG00000056481
Rab1b	ENSMUSG00000024870

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr5a2	MA0505.1	chr19:4597513-4597528	ACTGGCCTTGAACTC	-	7.4
POU1F1	MA0784.1	chr19:4598225-4598239	AATATGGAAATTAG	+	6.45
SMAD3	MA0795.1	chr19:4597723-4597733	TGTCTAGACG	-	6.02

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_08388

chr19:4593407-4601431

Liver

Enhancer Sequence

CAGCCTTTGG GGTTGACGCA GGGGGATTAC ACAGTAAATT CAAGTGAGCC TGAGCTATAT 60
TATAACAAGA CTTAGTCTCA AAAGATAGCC TTGACTGGCC TTGAACTCTT GATGGTGCTG 120
AGACCATTCA GTGCATTAGT GGGCCTGGCT TGAAGGCTCT GGATAGATCT GAACAGGGCT 180
TGCAGGGTAA CTGGACAGGA CTTGGGAGTG GGACCTGTGT GTCTTCTCAG TTGGAGGTAT 240
TATCTTTTAT GAAGCTGCTG TGTGCAACAC CTTGCTCTGT CTGCAGTGTG TGTCTGCAGT 300
GTGTGTCTAG ACGTTTGCAG GGAAGACCTC ACGTGCTGGG CTTTGTGTTG CTGTCAGAGC 360
TTCTCCTTAC TACTGAGCAG CAGCAAGATA CACACTGTGT AACTTACAGA CTTGTTTAAA 420
CTTTATCTGC AGTCCCTTTG TGTCCTTGCT GACAACAGAA GTCCAGGGTC CAATCAGCGC 480
CTATGTGCAG TTAGCTGTCG TTTTGTTTCC TTTCATTTGA ACTGATTCTC CAGTTCATGT 540
CCCATATGAA CTTTTACATA GTTGGGCTTT TTTTGTTGTT CATTGAGACA GAGTCTCTCA 600
CATAGTTCTG GCTGTCCTGG AACTCTGTGT GTAGATCAGG CTGGCTTCAA ACTCACAGTT 660
TCACCTGCCT CTGCCTCCTG AGTACTGGGA TTAAAGGCTT GTACCACAAT GCTTAGCATC 720
TTTCACATAT TTGAAACATT AATTTTGAAA CATTAATTTT ACATATTTGG AGGAATAAAA 780
ATTGTGTGTG TCTCCCATTG GGTAAAATAT GGAAATTAGG CTTTAGTTAA ACGTGGTTGT 840
ATATCTGAGG CAGGGCCCTG TAGGACTGTG GCTTCCATAC TCCTGAAGTG GATCACTTCA 900
GGACGTACCA 910