EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM085-14655

Organism

Mus musculus

Tissue/cell

Kidney

Coordinate

chr19:4496550-4496780

Target genes

Number: 24
Name	Ensembl ID

Acy3	ENSMUSG00000024866
Cdk2ap2	ENSMUSG00000024856
Aip	ENSMUSG00000024847
Coro1b	ENSMUSG00000024835
Ssh3	ENSMUSG00000034616
Adrbk1	ENSMUSG00000024858
Kdm2a	ENSMUSG00000054611
A930001C03Rik	ENSMUSG00000087132
Rhod	ENSMUSG00000041845
Syt12	ENSMUSG00000049303
2010003K11Rik	ENSMUSG00000042041
Pcx	ENSMUSG00000024892
Lrfn4	ENSMUSG00000045045
Rce1	ENSMUSG00000024889
Spnb3	ENSMUSG00000067889
Rbm4b	ENSMUSG00000033760
Ccs	ENSMUSG00000034108
Ctsf	ENSMUSG00000083282
Bbs1	ENSMUSG00000006464
Dpp3	ENSMUSG00000063904
Mrpl11	ENSMUSG00000024902
B3gnt1	ENSMUSG00000047379
Yif1a	ENSMUSG00000024875
Rab1b	ENSMUSG00000024870

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr19:4496574-4496594	CCCACACCCACACCCCCCCC	+	6.06
RREB1	MA0073.1	chr19:4496589-4496609	CCCCCCCCCACACACACACA	+	6.38
RREB1	MA0073.1	chr19:4496579-4496599	ACCCACACCCCCCCCCCCCA	+	6.68
ZNF740	MA0753.2	chr19:4496587-4496600	CCCCCCCCCCCAC	+	6.92

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_07916

chr19:4495751-4499705

Intestine

Enhancer Sequence

TACACACACA CACACATACA CACACCCACA CCCACACCCC CCCCCCCCAC ACACACACAA 60
GTTCCCAATG GCCACCAGGA CCAGGACCTC TTGTGTGCCT TTAGTAGCCC TACCAGGTTT 120
CTGAGCTCTG AGAAAACAAG GAGCCCATCA CTGCATTGCC CTTCGGAGTG AGGCCGTGGA 180
CTCTGAACCT GGGAGAGGCC CAGAGCCTGT GCATTAGTCA CTAGACAAAG 230