EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM085-11363

Organism

Mus musculus

Tissue/cell

Kidney

Coordinate

chr16:18420720-18421280

Target genes

Number: 16
Name	Ensembl ID

Slc25a1	ENSMUSG00000003528
Dgcr6	ENSMUSG00000003531
Prodh	ENSMUSG00000003526
Rtn4r	ENSMUSG00000043811
Zdhhc8	ENSMUSG00000060166
Trmt2a	ENSMUSG00000022721
Ranbp1	ENSMUSG00000005732
Mir1306	ENSMUSG00000080452
Dgcr8	ENSMUSG00000022718
D16H22S680E	ENSMUSG00000013539
Arvcf	ENSMUSG00000000325
Gm15764	ENSMUSG00000087556
Txnrd2	ENSMUSG00000075704
Comt	ENSMUSG00000000326
Gnb1l	ENSMUSG00000000884
Gm16314	ENSMUSG00000086965

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZIC1	MA0696.1	chr16:18420976-18420990	CACCCCCTGCTGAG	+	6.29
ZIC3	MA0697.1	chr16:18420976-18420991	CACCCCCTGCTGAGT	+	6.34

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_06211	chr16:18418234-18421375	E14.5_Liver
mSE_08340	chr16:18417799-18421485	Liver

Enhancer Sequence

CACACACACA CACACACACA GAGTTTGTAT TCACAAATAT ATACATAATC AATATACCAT 60
GTATAATCCG TTGAGAGCCA GGCCAATCCA AGGCTTTCTT AGAGGCCCTG ATGAAAAGAC 120
AAAGGAACCT GGTTCTATGT CCTTGCCCAG AGGCAGGCTG GCAAGGCCTA TACTTGCGCC 180
TGGGGTCAGG GACTGGAAGG AGGTAAGGTT TTATTTCCTG GGAATTTGAC TTTTAAACTA 240
ACCTCCCTCA CCCACGCACC CCCTGCTGAG TGACTGCTGT ATTGAGCCCT AAGGCTGCTA 300
TGTGCTTAGG TCTCAGACAC CCTTGAGAGA TCCTGTGTTT CCCTAGGCAA TATTGCTTGC 360
TCAGGGGCCT GCTGACTTTG TCCCACTGTA TGGTCGCTTC CCACTGACTG CCCCATGTCC 420
CTCTGCAAAA GTACATAAGA TAGTGTACTT CTTAATAAAC TTGCTAGGTA TAAGAGATAG 480
GTCATGCATA ATTCCTGAGC TACCTGTTCT GTCTTCTTTA TCTCTGATCT TTCCTCCTCA 540
GCATCCTGAC ACTGAAGAAC 560