EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM085-07273

Organism

Mus musculus

Tissue/cell

Kidney

Coordinate

chr13:23801440-23802490

Target genes

Number: 21
Name	Ensembl ID

Hist1h4d	ENSMUSG00000061482
Hist1h2be	ENSMUSG00000047246
Hist1h1e	ENSMUSG00000051627
Hist1h2ac	ENSMUSG00000069270
Hist1h2bc	ENSMUSG00000018102
Hist1h1t	ENSMUSG00000036211
Hist1h4c	ENSMUSG00000060678
Hfe	ENSMUSG00000006611
Gm11338	ENSMUSG00000083206
Hist1h1c	ENSMUSG00000036181
Hist1h3c	ENSMUSG00000069310
Gm11336	ENSMUSG00000080999
Hist1h2bb	ENSMUSG00000075031
Hist1h3b	ENSMUSG00000069267
Hist1h4b	ENSMUSG00000069266
Hist1h4a	ENSMUSG00000060093
Hist1h3a	ENSMUSG00000069265
Hist1h1a	ENSMUSG00000049539
Slc17a3	ENSMUSG00000036083
Slc17a1	ENSMUSG00000021335
Slc17a4	ENSMUSG00000021336

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr13:23802442-23802463	AGCCACTTTCGGTTTTGCTTC	+	6.18
ZNF263	MA0528.1	chr13:23801998-23802019	CCCCCCCCCCCCCCCGCCCCT	-	6.23
ZNF740	MA0753.2	chr13:23801998-23802011	CCCCCCCCCCCCC	+	6.03
ZNF740	MA0753.2	chr13:23801999-23802012	CCCCCCCCCCCCC	+	6.03
ZNF740	MA0753.2	chr13:23802000-23802013	CCCCCCCCCCCCC	+	6.03

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_00521

chr13:23780814-23804231

pro-B_Cells

Enhancer Sequence

TGGACTCTCC TCTCTTAACC TCTTATCCTC TTCCAAGGCT GAAGACACAA AGATATTGTC 60
CCAAACCTGA AGTTCCCTTG GATTACAGGA ATACCATCAA CGCCTCAGAA CAGGAGTCAC 120
CCTGTTTCTC ACCCCCATCA CACTAAAGCA ATTATCTATG ACGTCTAGGC AGCACGTTGG 180
GGCAGAAGAA ATTGCTCCAT TGTGCCCTAA CAACAAACAG ATGAACAATT TATGGACTCG 240
GATGCAGGCT CCAGGGCGGT CTATCCAGAG AAATCCGTTC CTTTCTCTTT AAATCTAAAT 300
GTCATGGCAG GACCCTGAAA ATGGACTCTT TTGCTGGGTC ACTTGATCTT CCCAGTATGA 360
CAACACTGAA TAGAACTGTT TCGTTATTAC TGGGCTTTTT AATTGGAACA CTGTTGCCAA 420
CCACAAGGGC TGCCAGAGTC CTGGCCTTCT GCCCTAAAAT GTTTGGTTAC AGTATTACAT 480
CCATTTGAAA TGATGAAAGA ACAATTGTCA AGAGTGAGGA GAGGTCTAAC CCCCGACCCT 540
GACCTCCGCC GCCCCGCTCC CCCCCCCCCC CCCGCCCCTG GCTCCAAGTG ACCTTTGCTT 600
TGTCTCACAC ATACACACAC AAAATTAACA CAGTGGGAGT GCGACCCAGC ACCCCTAGTG 660
CTCACAAGGA AAACATCTCA GCCCCTTTCC CAGCACCCTG AAGAGAAAAT GCCAAAGGAC 720
GACGTTGGTC ACTCTTGGTG AGAAATTTCA GATCTCCGGT TAGTTAGGGA GGTAGGGTAA 780
CACAGTCCAA AATATAAACA CTAAAGCAGA GATTGGAGAC CCAGGCTCAG CTAAGCCAAC 840
GTGACTCCTC GCTAGTAACA CTCTGACAGA GCAGGGGCAG AGGTGCCCTA GGCTGCTAGT 900
GGTGTGGCAG GTGTTCCCTC TGGGGGTCTG CAAGCTGAGA GCTGGAAGAG ATCAGAGAGA 960
AAGTAGTTCG CCTTCGAAGA GAGAAACACC AGGCGCCAAG GAAGCCACTT TCGGTTTTGC 1020
TTCCCACACC CCCACCTTTT TCCTCCCGCA 1050