EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM085-06833

Organism

Mus musculus

Tissue/cell

Kidney

Coordinate

chr12:101525740-101528430

Target genes

Number: 4
Name	Ensembl ID

Psmc1	ENSMUSG00000021178
BC002230	ENSMUSG00000021179
Calm1	ENSMUSG00000001175
Ttc7b	ENSMUSG00000033530

TF binding sites/motifs

Number: 11

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GATA2	MA0036.3	chr12:101526165-101526176	AGAGATAAGAA	-	6.32
Gata1	MA0035.3	chr12:101526165-101526176	AGAGATAAGAA	-	6.32
HNF4G	MA0484.1	chr12:101527664-101527679	TGGACTTTGAACTCT	-	8.73
Hnf4a	MA0114.3	chr12:101527662-101527678	ACTGGACTTTGAACTC	-	7.36
Myod1	MA0499.1	chr12:101527296-101527309	AGCAGCTGCCCCC	+	6.03
Nr2f6(var.2)	MA0728.1	chr12:101526374-101526389	GGGGTCAGAAGGTCA	+	6.73
RARA	MA0729.1	chr12:101526374-101526392	GGGGTCAGAAGGTCACTT	+	7.13
RREB1	MA0073.1	chr12:101528143-101528163	TGGGGGGGGGGGTGTTGTGG	-	6.71
RREB1	MA0073.1	chr12:101528145-101528165	GGGGGGGGGGTGTTGTGGGT	-	8.4
Rarb	MA0857.1	chr12:101526373-101526389	TGGGGTCAGAAGGTCA	+	6.39
ZNF740	MA0753.2	chr12:101528142-101528155	ATGGGGGGGGGGG	-	6.07

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

mSE_03996	chr12:101527874-101528608	Cortex
mSE_07443	chr12:101525446-101528892	Intestine
mSE_10911	chr12:101526920-101528085	Olfactory_bulb
mSE_10911	chr12:101528113-101529965	Olfactory_bulb

Enhancer Sequence

GCCTTCAGAC TACCTCTTGG AGGAGGGACA GAGGATGGCA CACTGGAGCA CAAGTAGTAG 60
ACATTTTGGT ACCCTCTGCT TTCCACCCCC TAGCCTGCAA ACTTGGATTT GCTCAAGGCG 120
GTGAGAAACA ATTTGTCCCC ACCATGACCA CTCTTTGGCC AGATTCTCTG TTTGTCAGAC 180
TCCTTTGCAG CTAGCAGAAG CCATTGGCAC AACACCAGGC AATGACATAT AAGGGAAGGT 240
CTCTGGGAAG ACTTCCAGTC CAGAAGGAGG GAGGTTCTGC TTCTCCATGA AGGAGTGTGT 300
GGCAAGAGGG TTTTCTTAAG TTGCCATACT CTTTGTTTAT GACGGATTAC AGACATAATG 360
TCTGGTGTGA CAGCAGTCAC CCTACAACCA TGTGGCTCCA GCTTAACCCT GAAGATGATG 420
GGCACAGAGA TAAGAACCAA ATGATCCTGA GGCCACCTAC TTGTGGTTCA GTTGGAGTCT 480
CTTACTTGCA CACCAGAGAA GCACTGGAAT CTGGGTGCGC ACAGTGGGTC CTCAGGAAAT 540
AGTGGCTGCT GCCACTACGA TGTGTGTGCA AGTTGCTTAC TCAAGTGAGT GCACGTGGAT 600
GATGGATCTG TGGCTTACAC ACACAAGGAC CTCTGGGGTC AGAAGGTCAC TTAAGTCCAG 660
GAAGTGTCAC TTGGCTCAGG CAAGCGGACC ACTCCCTTTG GCTTGCTGAG AGGCAGCTTC 720
CTTGACTGTA TGCTGAGAAT GAGGGCAAAG TTTCTAGTTA GCACTCTGGG CCTCACACCT 780
CAGAGACAGA GGTGAAACAC TGGCCCCATC TGGGGAAACT GAGACTCAAA GGGGCCCATG 840
GAAATGCCAA AGCTGAAAGC CGGGAATGGT GGACCATGTG ACCTCACGCA GACTCTATAT 900
GTGGGAGGAC TGTGTGTGTG CAGAGTTGAG TGTGTGATTG TATAAGGGCA TGTGGTCAAG 960
GATGCGTGTG TGTGCAAGTG TGTTTGTGTG TGTGTGTGCA AAGGTGCACA TATAGGGCTG 1020
TGTATGCAGA GGTATGTGTG CAGGGTTTTA TATATGTGTG TATAGACTGT GCATACATGC 1080
AAGGGGCCTG TGTATACATA GAGATATGTG TGTACATAGG TAAGTGTGTG TATGTGCATT 1140
TATATACAGG AACATACAGG AGTATATATG TAGGATCTGT ATATGGGGTG CGTGCATGTG 1200
TGCAAGTGCA TGTGTGCAAT CATGTGTGTA TGTGTGAGCG TGAGCAAGGG TGCACCTTAA 1260
GTGTGTTTAC ATGTGTAGGG TGCATGCATG AAGTCACTCC TCTAGTATGG AGACAAACCC 1320
TAGAGATCTA GAGACTTCTG CTTTGAGGGT GTCTGTCCTC AGCCCTAGTA GAGTGGAGGC 1380
ACCTTGTGCA TCCTAGGCTC CCAGACTCCT GGCTCCACAG GGCACCCCTG TGCACCTCTG 1440
ACTCCTCAGA GACCAGCACT CCCCAGGTCT GCATGCTCCC TGAGGCTGCC TCCTGCTCTC 1500
TTCAAAACAC TACCACCAGC AGCAGCAGCA GCAGCAGCAG CAGCAGCAAC ACTGGCAGCA 1560
GCTGCCCCCT CTTTCTGGGC CAGCCTGGGC CTGACCTGTC CAGCTGCTAA GGCTACCTTT 1620
AGTGGATGTG TTTTCTGGGA ACCAGACTTC TCCTCCCAGC ATCTTCCAGG CTGAGTAGCT 1680
GGTCTAGAGG CGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGCTGC TCCTCAGAAA 1740
GCTTTCCTGA GGTCTGTCAA TCAATACCCA TCAAACCATG CGGCATCCTC TAGGTTTCAC 1800
CAGCTGGGCT CATCTGAGGA GTTGGGCTGG GACCTGCAAA GCAGGAAGGC AGGTGAAGGA 1860
AGTTCCAGGC TCCTAGAATC CCCTCCTCAC AGAGCCTCCT GGCTTCCCAG AGGACAGGAT 1920
CCACTGGACT TTGAACTCTG GCACATTGGT TGTCCTGTGC TGGCCAGCTC TGGGAAAGCC 1980
TCCTAGTCTT ACCCCGCAGG AGGTCTAGTT TTTTGTCTTT TTGTTGTTGT TGTTGTTTAA 2040
CCTCATCCTC AGATCCATCT TTCACCTGTA GTGTGAGGGA GCTCTGACTC TGGGGTCACC 2100
AGTCTTCCAG CTACCGGTCC CCCTCACCTT CACAAAAACT CATCTGCCCC CCTCCCACCC 2160
AGAAAACTCA CCGCCTTGTC CTAGTATCCT CCTTACAGGG AAGCTTTGAT CCAGCCTGGG 2220
CCCTGCGCCA AAAAGTCATT AAAACAAAGA GCAGCCAAGA AGAGGGGAAA ATATCCCTTC 2280
TGGCTGGAGA AAGCCAAACA CTGTAACACT CCAGGCTCAA GCTCTCCCGG GAGCGGGAGC 2340
AGAGCTGAGG GCTCAGGGAG GGTGGGAGTG GGGGCAGGGT ACATACAGTG GGAGCTAAAG 2400
CAATGGGGGG GGGGGTGTTG TGGGTGGCTC CAAGGCTGAC AGGCAGAGTG CAGAGCCTGA 2460
TTTATGTCTG CTGTGGCCTG GAGAAACACC CTGCCCCTTG GGGGACCATA ACCTTGCTGG 2520
GTTGGGCACT ACAGGGGCTG GCATGGAGTC CCTGGTTCCT GATGTGTCCT GTAGCTAACA 2580
GACATTGGGG AGGGAACACT ATTGGGGCCA CGTGTGTGTT GTAGCTGGCA TGAGACTAAC 2640
AGAGAAACCG AGGTACCATT GGCTCTTCCT GAGTTCTCTG TACCTGTCTT 2690