EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM085-05023

Organism

Mus musculus

Tissue/cell

Kidney

Coordinate

chr11:96196860-96198730

Target genes

Number: 19
Name	Ensembl ID

Mir3063	ENSMUSG00000093358
Snf8	ENSMUSG00000006058
Ube2z	ENSMUSG00000014349
Atp5g1	ENSMUSG00000006057
Gm11539	ENSMUSG00000083337
Gm53	ENSMUSG00000078706
Mir196a	ENSMUSG00000065546
Hoxb9	ENSMUSG00000020875
Hoxb8	ENSMUSG00000056648
Hoxb7	ENSMUSG00000038721
Hoxb6	ENSMUSG00000000690
Hoxb5	ENSMUSG00000038700
0610040B09Rik	ENSMUSG00000085645
Hoxb4	ENSMUSG00000038692
Hoxb3	ENSMUSG00000048763
Gm11536	ENSMUSG00000075589
Hoxb2	ENSMUSG00000075588
Hoxb3os	ENSMUSG00000084844
Skap1	ENSMUSG00000057058

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr11:96197920-96197940	TTATTGTGGGTGGGGTGGGG	-	6.17
ZNF263	MA0528.1	chr11:96198503-96198524	CTTTCTCCCACCCCCTCCCCT	-	6.03
ZNF263	MA0528.1	chr11:96197747-96197768	GGATCAGGGGTAGAAGGAGGG	+	6.12

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_02607

chr11:96191131-96210198

HFSCs

Enhancer Sequence

CACCTTCATA CAAACAGCTT GGTTTTAAAG AGGGGCTCAC TGAGGCCCAA AGAATGCTCA 60
ACTTCGAGTC ACACAGCCAA GCTGCCATGA TTAAAGGCTC AAGCCTGTAG CAGGCATAGC 120
TTAAGATCAA TTTATTTTCC ACTGTGGCCC TCAGTTTCCC TCTCTGCTAC AATAGCAGAG 180
TTGGACTAGA CACTTCAAGT TCTCCCCCAT TCTGCTCTTG GGTGCCCCTC AGCATCTCTT 240
CGTCTGTGGG ATACTGCTTG GGGGGTAACT TCCTGTGTAT CTGGCAGTTC TGTGGCTATT 300
TGACTGTAGA AGTTATTGCA TGATTTGTTT GCAAAATTCG GAGTTTGTCT CTGCCTGTAC 360
CTCTAGAAAT TAAGTCCTCT GGACTATGTG TTTTGAAGGA ATCCCTGTTC TCAACAGAAT 420
GGACACCCAG GTCAAGAGCA ATGACAATAG AGGCCTAGCT AGATGGGGTG AGCCAGGATT 480
GGCACAGGGC CTTAGCTTCA CCAGACAAGC CTCTTTCCCT GTTAAGATGC TAAGTCAGGG 540
CTGGAGTTGT CCAGAAGCAA GCATCTGAGG TTCCTCTTAC CTTAGGCCAA GACCTGGATG 600
TGGGATCACA GTTTAGAATC TGTGGAAGCA GGCGCAGCTT CACCACAGAC TCAGCCTTGA 660
TCCTGGACAG TTAGACCTTC TTTATCTGGG AGAAGGCAGG ACGTACACAG CGTGCCATAG 720
CACCATACTG TCTGTCCTTC CAGGGTAACT AGAACTGAGG CCAGCAAAAT GGAAGGTCCC 780
TACTTTGTTT CACTCTGTTT CCTTTTTCTT CTTCCAACTA CAGAGACACG AAACTAGAAG 840
GCAATGGCTT CCCAGATGCA CAGCTATGTG AAGGGCAATT TCTTTTGGGA TCAGGGGTAG 900
AAGGAGGGTA ATGGGTTTCT GGGAATTTTT GGATGCCCAG GAAAAATATG GCTTGGTGAT 960
TCTGAGGCAG GAAGTGGAGA CAGCGAAGTA ACTTCAATTT TAGAAATCCC AGGCTCTGGT 1020
CAGACAGTCC AATCCTCCAA ACCTATTTTG AGAGAGAAAG TTATTGTGGG TGGGGTGGGG 1080
GAAAGACTGG CAGACCCAGA CTCTGGTCCT ATCCCATTCT GACTTTGGAG TTTTATATTT 1140
GGAGGCCTTC CACTGATTGG CTATTAATCC AGTGAGTTAT TGTCTACTAA ACAAAGGTCA 1200
TTGGGAGAGA GACGTCCAAT CAGTCAGGAG AGACTCTGCC TGCAGGCCAC TCAAAGTGGA 1260
CTGTGCCCTT CCCTTCAGCC AGCCGGTCTT TGCCACTATC TCCCACCTTC CCCTAGCTTA 1320
CTCCTCCAGC TGCCCAGGAC TTACAGTCTC TCCCACCCCA CTCCCCTCTG CCTCTCCATC 1380
CTGGCTACCT TTGTCTCCAC ACTGATAGGG GTGGGGTTTT CCAGGACTAA ATTAGATGTC 1440
CCTGATTTAG AAACGGATCT TTCTTGACCA AAGAGCCTGC CTGCAGCTAA TTGTGGTCCC 1500
CTTAGTATTA GTTTAAGGGG TCTTCCACTG GCACCCAGGA GACTTTATAG ATCCATGTGG 1560
TGTTCTTTCT TTCTTACTCA TTCCTAGTCT GAGGCGGGGT GGGATAGAGC CTGGATTTTC 1620
TTTTCTTTGC TCATTGGGTC AGGCTTTCTC CCACCCCCTC CCCTCCGAGT TATCATCAGC 1680
TGCGTCTACA CTGGCCTTGG GGAAAGCGCT CAGATCTCCT TCCCATGTTT CTTTGTTCCT 1740
TCCCACTCGA GCATTTTGAG AGAGTCAGGG ACAAGGGAAA CACATGTCTA CTCTACAAAG 1800
CCATCTTCAT TAACAACACC TTCCTCCTTC CTCCGTTTAC AAACCTAAAG CTTTAAAATC 1860
TTCATTAATA 1870