EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM085-05017

Organism

Mus musculus

Tissue/cell

Kidney

Coordinate

chr11:96159340-96160480

Target genes

Number: 21
Name	Ensembl ID

Phospho1	ENSMUSG00000050860
Mir3063	ENSMUSG00000093358
Igf2bp1	ENSMUSG00000013415
Snf8	ENSMUSG00000006058
Ube2z	ENSMUSG00000014349
Atp5g1	ENSMUSG00000006057
Gm11539	ENSMUSG00000083337
Gm53	ENSMUSG00000078706
Mir196a	ENSMUSG00000065546
Hoxb9	ENSMUSG00000020875
Hoxb8	ENSMUSG00000056648
Hoxb7	ENSMUSG00000038721
Hoxb6	ENSMUSG00000000690
Hoxb5	ENSMUSG00000038700
0610040B09Rik	ENSMUSG00000085645
Hoxb4	ENSMUSG00000038692
Hoxb3	ENSMUSG00000048763
Gm11536	ENSMUSG00000075589
Hoxb2	ENSMUSG00000075588
Hoxb3os	ENSMUSG00000084844
Skap1	ENSMUSG00000057058

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Gata1	MA0035.3	chr11:96159363-96159374	AGAGATAAGGA	-	6.02
RREB1	MA0073.1	chr11:96159848-96159868	CCCCCCACCACCACCACACC	+	7.85
ZNF263	MA0528.1	chr11:96160212-96160233	AGAGGAAGGAGGGGGAAAAGG	+	6.17
ZNF263	MA0528.1	chr11:96160216-96160237	GAAGGAGGGGGAAAAGGTTGA	+	6.4
ZNF740	MA0753.2	chr11:96160027-96160040	GTGGGGGGGGAGG	-	6.87

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_07983

chr11:96140425-96162788

Kidney

Enhancer Sequence

TTCTTGCTAC ATCATTTGGC CTGAGAGATA AGGATAGATG AGGAGAGACC AAGCAAGGGT 60
TGCAGGAAGA ATAGAGATGA AAACAAGTAA AGTTACCTAG GCTGGGGTTT CCCCTTCATC 120
ACCAAGTTTA AGGACTACTA GTTTCTTTCT CCAGGGCCCA GTCTCAGTCA AGACTGCAGC 180
CAGGACGGCT GAGCTGTGCT GGGCATACGG ATGGTCGGCT TGCCAAATAG CAATAGCAAA 240
TAGCTTCGGG GAGCAGCCAG AGGGAGAAAC TGGGCTCACA CACCCCTGAC ATTTCCTTCT 300
TTTGGGTCTT CTAGGCAGAA GGAACTGGCT TGCCCTCCTC TAAGCTGGGG AATTGGGTTG 360
AAGTCGGGAT ACAATAAAAC CTAAACTTAA AAGGGGGAAA CAGGCCTGAT AAACAATAAA 420
CGATTTTCCA AACCTTCAAA GGAGGGTGTT TCTTCTTTTC TTGTTTCTAA AATGAAGCAA 480
ATAAGCGGAC AAGTCCGTTC TCGTTCCACC CCCCACCACC ACCACACCAG TACAAAACCC 540
TAGAAACAGA CCTTCCCCCT TTATTCTCTC TCAACGAGAT TCGAGGATAT TTACCCAGCC 600
CTCCCTTGAG GGAACGGGCC CATGCAACGC AGGGGTTAAC TTTTCTGAAA ACACAATTAA 660
CTTTTCCCTA TTCCTGCGTG GGGTGGGGTG GGGGGGGAGG TTGTATTTAT TTCATCACTG 720
GGGAATGGGA TGATCTTCAT CTAACTGCTT CCTCCTCCCT CAAAAGCACA GACGTCTCTT 780
TCGCAGATCA TACGTAGGTG GATCAGGGCG CGTTGTGGAG AGAGAGAGAG AGAGAGAGAG 840
AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGGAAG GAGGGGGAAA AGGTTGATAG 900
GTTTGTGCGC GGGTCCCTCG TGCAGGCTGC GCTCCTCCTG GGTGCTATTT GACAATTCCT 960
GCCTCTGCCA TTGGTCAGTG TTGGATCAGA TGGTTGTATT TCCTTCTGGC CCTCACTGGC 1020
ACCTCGCCAT CCCCCCTCAG CTAAAACCCA ATCTCGGCTA TACTACTAAT AGGCGCGGCG 1080
CTCGGACTAT AAAACACAAC AAATCATAAA CCCGGCGGAG CAGCAGCGGC CTCGCGCGCC 1140