EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM085-04234

Organism

Mus musculus

Tissue/cell

Kidney

Coordinate

chr11:69197360-69199290

Target genes

Number: 23
Name	Ensembl ID

Vamp2	ENSMUSG00000020894
Cntrob	ENSMUSG00000032782
Trappc1	ENSMUSG00000049299
Kcnab3	ENSMUSG00000018470
A030009H04Rik	ENSMUSG00000043419
SCARNA21	ENSMUSG00000087881
Gm17305	ENSMUSG00000091095
Chd3	ENSMUSG00000018474
Lsmd1	ENSMUSG00000059278
Cyb5d1	ENSMUSG00000044795
Tmem88	ENSMUSG00000045377
1700064E03Rik	ENSMUSG00000085178
Kdm6b	ENSMUSG00000018476
Dnahc2	ENSMUSG00000005237
Efnb3	ENSMUSG00000003934
Trp53	ENSMUSG00000059552
Shbg	ENSMUSG00000005202
Sat2	ENSMUSG00000069835
Fxr2	ENSMUSG00000018765
Mpdu1	ENSMUSG00000018761
Cd68	ENSMUSG00000018774
snoU6	ENSMUSG00000089542
Eif4a1	ENSMUSG00000059796

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr11:69198916-69198928	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr11:69198920-69198932	GTTTGTTTGTTT	+	6.32
Nr5a2	MA0505.1	chr11:69197918-69197933	CAGTTCAAGGTCAGA	+	6.74

Enhancer Sequence

GCCTGGCCTG GTTTCTTCTC TGCCCTCCCC ATGCTGCACA TCCTCGCCTC TAAGGTGTGT 60
GCTGTCCTCC ACCTGCCCCT ACCCTCTCCC TGGCCTGACA TGGAGGCAGA CACCTCCCTG 120
CCTTCAGGTC TCAGCTTGAG ATGACATTGC TCCGGAAACC TTCCCTGGTC CCCACGGAAG 180
GGGATGGGGA TAGCTAGCTG CCTGTGTTCC TGAGCACAGC CTAGGCCATG GAGCTACCCA 240
TGTTACTTTA CTCCTGTGTA GCATTGGCTG ATCACACATT TGTTGATTGT TGTGGATATT 300
TGTTGAACAG CTGCTCTGGG CTGGGTATGG AGCTAGTGCT GAGTGTTCCG TGGCAAGTGA 360
GTCTCTATTC TCTTAGGCTC TAAGAAGGAA AAAAGGTGGA CAGGAACCTA TACCACAAGG 420
GCCAGTGATG TTGTTTGGTG CATAAAGTGT TTACATGGCA TTGGCAAAGC CCTGAGTTCA 480
CACCCCAAGC ACTGCATAGA AACCTGGTAT TGTGCTGCAT TCATGTAATC CAGCATTGGG 540
AGGCAGAGAC AGGAACAGCA GTTCAAGGTC AGAGCCTTTA TGGTGAGGAC TCGGCAGGTA 600
GAAGTGTTTG CTGAGCTAGC CTCAAACATG CCGTAACCCA CATATCCTCA TGCACTCTAA 660
TAATAGCATT AGCATAAAGT TCTTTATAAA TATACATTTA TGCCAGGCAT GGTGGCACAC 720
ACTCTTTATC CTGGCACTCA AGAAGCAGAG GCAGGCCAGG CGGTGGTGGC ACAGACCTTA 780
AATCCCAGCG CTTAGGAGGC AGAGGCAGGT GAATTTCTGA GTTCGAGGCC AGCTTGGTCT 840
ACAAAGTGAG TTCCAGGACA GCCAGGGCTA CACAAAGAAA CCCTGTCTCG AAAAACAAAA 900
AAAGCAAGCA AGCAAGCAAA AAACCAAAAA ACAAAAATTA AACTTTAAAG ATCATACTGT 960
TACAAGCAAG TCTGAGGCCA AACTGGGCTC TAGAGACCTT ATCTTAACAT GAAGGCAATA 1020
GAGGTTTGGA GTGGCTTCAC TGGTGAGGTG ATTGCTGTGC AAGTATGATG ACCTGAACAT 1080
GAATCCTTAA TGCTTAAAGT CAGTCATGGC ATCCTGTGTT AGTAATCCCA CCACTGGGGA 1140
GCTGAATACC CCGGAGCTCA CTGGTATAGC CACATCGTGA GCTCCAGAGC CAGTGAGAGA 1200
CACCATCCCA AGCAATAGCC CAGAGAGGCT GGAGGTCAAG AACACCAACT GCTCTTAGAG 1260
GACCCAGAGC CTTCTGTGAC TCCAGTTCCA GGGCACCCGA CACCTCTGGG GGCACAAAAC 1320
ACGTGGCTGT GAGTCACGGT GTGGATGCTG GGAATTGAAC CTTGTCCTCT GGAAGAGCAG 1380
CCAGTGCTCT TAACTGCTGA GCCAGCCATC TCTCTGGCCT CATGTTAAGA GTTTATTCCT 1440
TAACTCTAAG GAAGTCTTTG GAAACTTTAA CAACTCCCTG CCTACTGTAT AAAAGTGGAA 1500
GACGGATGGC AAGTTTAACA GGTCCCAAAC TTCCCCGAAT CTCCTAATAA GTTTTTGTTT 1560
GTTTGTTTGT TTGATAAGTT ATTTCTCCAC CAGAGAAATG AGCCAATTTA TGCCAGATTA 1620
GTTTCTATTA AAGGGAGGTT TGTTGGGAAG CTGCTTTCAG GCAAGTTCAC TGGCCCCAAG 1680
GACTAAGGCC AGGGGAGTTG CCATGGAAGG GAGAGGTGGG AGGAGAGAAG AGAAGCAGAA 1740
GAAAGACAGC AGGGAGACCA AAATGCCTGG AGTATCTGAG GAAGAGCCTC TGTGGGAAGG 1800
CAGCCCAGCC CCTGGGCTGG CAAGTTCATA GTTGGGGCAC AATATTCCAG GTAGGGTCTG 1860
AGGGATGCTG GGATGTGTAA GATATGCACC TCTGTCCCTT GTCCGGGGGC CTGAAACCAA 1920
ACATTGCTTC 1930