EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM085-04063

Organism

Mus musculus

Tissue/cell

Kidney

Coordinate

chr11:59243370-59243960

Target genes

Number: 14
Name	Ensembl ID

A230051G13Rik	ENSMUSG00000049287
Guk1	ENSMUSG00000020444
2610507I01Rik	ENSMUSG00000085882
Mrpl55	ENSMUSG00000036860
2310033P09Rik	ENSMUSG00000020441
Arf1	ENSMUSG00000048076
Jmjd4	ENSMUSG00000036819
Snap47	ENSMUSG00000009894
Zfp867	ENSMUSG00000054519
Gm12263	ENSMUSG00000084145
4933439C10Rik	ENSMUSG00000072893
Zkscan17	ENSMUSG00000020472
Nlrp3	ENSMUSG00000032691
Mprip	ENSMUSG00000005417

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6(var.2)	MA0728.1	chr11:59243687-59243702	AAGGTCCAAAGGACA	+	6.11
RARA	MA0729.1	chr11:59243687-59243705	AAGGTCCAAAGGACAATT	+	6.67
Rarb	MA0857.1	chr11:59243686-59243702	AAAGGTCCAAAGGACA	+	6.09

Enhancer Sequence

TATGGTAAGA GAATCCACCC GACAGGGAGA CTTAACAATC AGCATCTATA CACCAAACAA 60
CACCGCTTCA AAGTTCATGA AGCAAAAAAC TGACAAAGGT AAAAGAAAAA ACAATCACAG 120
TTGTAGACTT CAACAGTTAC ATTTCTTTCA ATGACTGATA GGACAAGACG ACACACACTC 180
AGTAAGAACT TAGGAGTTTT GGAGAGTGTT ATGGCAGCTC AGCCTGACTG AGAACAGCAT 240
CACCAGCATC TGCTGAGTGT ACTCTGCTCT CAGCTGGACA CAGACTGCTG ACAGGAATGC 300
AGCTAGGTGC AAAGGCAAAG GTCCAAAGGA CAATTACAAA TCTGAAAATA TTTACAGATT 360
AATGCATTCT GAAGTACATG TACCAAAAAA TGCAAAAAGG AAATCAGAAA ATAGTTAAAG 420
GGGCTAGAGC CATGGCTCAG TGGTTAAGAG CACTTGCTGC TCTTGCAAAG AAGCTGGGTT 480
CCTTTCCCAG GACCTACATG GTGGTTTACA ACCAACTATA ACTCCAGTTC CAGGAGATCG 540
GACACCTTCT TCTGCCCTCC AAGAGCACAA GTATGCATTC GATATACATA 590