EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM085-01540

Organism

Mus musculus

Tissue/cell

Kidney

Coordinate

chr1:173052870-173053170

Target genes

Number: 28
Name	Ensembl ID

Atf6	ENSMUSG00000026663
Gm9929	ENSMUSG00000053925
Fcgr2b	ENSMUSG00000026656
Fcgr4	ENSMUSG00000059089
Fcgr3	ENSMUSG00000059498
1700009P17Rik	ENSMUSG00000026649
Sdhc	ENSMUSG00000058076
Mpz	ENSMUSG00000056569
Pcp4l1	ENSMUSG00000038370
Nr1i3	ENSMUSG00000005677
Tomm40l	ENSMUSG00000005674
Apoa2	ENSMUSG00000005681
Fcer1g	ENSMUSG00000058715
Ndufs2	ENSMUSG00000013593
Adamts4	ENSMUSG00000006403
B4galt3	ENSMUSG00000052423
Ppox	ENSMUSG00000062729
Usp21	ENSMUSG00000053483
Ufc1	ENSMUSG00000062963
Dedd	ENSMUSG00000013973
Nit1	ENSMUSG00000013997
Pfdn2	ENSMUSG00000006412
Klhdc9	ENSMUSG00000045259
Pvrl4	ENSMUSG00000006411
Arhgap30	ENSMUSG00000048865
Usf1	ENSMUSG00000026641
Tstd1	ENSMUSG00000091166
F11r	ENSMUSG00000038235

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RFX4	MA0799.1	chr1:173053092-173053108	GGTATCCATGGCTACT	-	6.33
RFX4	MA0799.1	chr1:173053092-173053108	GGTATCCATGGCTACT	+	6.36

Enhancer Sequence

TGGGGGGTCT CAAAGTTTGT TTAAATAGTT GAAGATGTCA TTCAAAGACA ACCTGGAAAT 60
TCTGAAGCAG ACTTAACTAT GTTGGGGAAA CAGCTATTTA CATGACAGTT ATCCCTGATT 120
TGTTTTGGAC ACATGCAAAG TATAGTAACT GAGGCAAATG CAGCGGTCCT GCTCAGTGGT 180
CCTGGGATTT TGGAAGCAGA GGCAGGAGGA CGGGGTGTTC AAGGTATCCA TGGCTACTTC 240
TCAGTTCATT TTCTCATGTT TGTTTGGGCC TCTATACTCT AAAATGAAAA TGAACCTACG 300