EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM085-01532

Organism

Mus musculus

Tissue/cell

Kidney

Coordinate

chr1:172797040-172797780

Target genes

Number: 15
Name	Ensembl ID

Gm9929	ENSMUSG00000053925
Dusp12	ENSMUSG00000026659
Fcrlb	ENSMUSG00000070524
Fcgr2b	ENSMUSG00000026656
Fcgr4	ENSMUSG00000059089
Sdhc	ENSMUSG00000058076
Mpz	ENSMUSG00000056569
Pcp4l1	ENSMUSG00000038370
Ndufs2	ENSMUSG00000013593
B4galt3	ENSMUSG00000052423
Ufc1	ENSMUSG00000062963
Nit1	ENSMUSG00000013997
Pfdn2	ENSMUSG00000006412
Tstd1	ENSMUSG00000091166
F11r	ENSMUSG00000038235

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

MEF2A	MA0052.3	chr1:172797137-172797149	ACTAAAAATAGA	+	6.27
MEF2B	MA0660.1	chr1:172797137-172797149	ACTAAAAATAGA	+	6.32
MEF2D	MA0773.1	chr1:172797137-172797149	ACTAAAAATAGA	+	6.92

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_01615

chr1:172775490-172799091

Macrophage

Enhancer Sequence

ATTCTGTCTT GAAATCGAGA AGGGACTATC AGCTTTCTCT AAGGATTTGG ATGCCAAAGC 60
TTGTTCCTTG TCATTCTCTG GTCCATCCTT CCTGAACACT AAAAATAGAC TTAACAAGAG 120
ATTTCAGAGC TGTGTTTGGA CAGCAGTCAG GATTACATCA GTTTGTGTTA GATCTAGTAA 180
TCAGGGACAC GAGGTCAGGT GCTTGGGAGA GTTTCTTCTT TGCCAATTTG GATCTATGTC 240
TTAAACCAAC AGTTCAAGCT GGGAGCCAAG GATTTTCTTC TGTATTTTAA CCAAGTTTTC 300
TCAACATATC TCGTACACGT TCAGTGCGCG CGCGCGCACA CACACACACA CACACACACT 360
CACACACACA CATACACACA CACACACTCA GCGCTCCCCA GCCACACGCC CACAGTCTGA 420
GAAAATAGCT TGGAGCCTTT GGGGCAGCTA CAATCATCAT CCTACTAAGT TCTGGTCCCT 480
CACGATCACC TGGAATTTCC ACCAGGAACA CACGCTGAAA AACTACAGCA ATTTCAATTA 540
GAACATCATT CCATTATTGC TACGGCCAGG ACAGAAGCCC AGAGGCTCTG CCAGCCTCTT 600
CTACGACCCT CAACCCGTGG CCTCGCTCCC CGGACACGGG TCGTCCACAC CTGTCACCGC 660
CACCGGGCGG AAATCGGGAG GAGAAAAAAA CCCGCAGACG CGGCCCGACC TAGCTCGGGT 720
ACATTCGCAG ATCCACTCAC 740