EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM085-00911

Organism

Mus musculus

Tissue/cell

Kidney

Coordinate

chr1:120546180-120547460

Target genes

Number: 3
Name	Ensembl ID

Clasp1	ENSMUSG00000064302
Tfcp2l1	ENSMUSG00000026380
U1	ENSMUSG00000088363

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF14	MA0740.1	chr1:120546984-120546998	AGACACGCCCACCT	+	6.09
LBX2	MA0699.1	chr1:120546617-120546627	GCTAATTGGC	-	6.02
SP8	MA0747.1	chr1:120546985-120546997	GACACGCCCACC	+	6.02

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_08084	chr1:120545482-120547676	Kidney
mSE_10104	chr1:120541214-120548866	Embryonic_stem_cells

Enhancer Sequence

TGCTGGCTTA TCAGTCTAGC TGGACTGGTG AACTCTTATC TCAAAAAGTA TGGTGGAAAA 60
CCAGGCATGA TAACAAACTC ATTTAATCTC AGAAATTTGC AGATTCTGTG AGGGTTAGGG 120
AGGTCAGTCT GGACCTAGTA TGTGTAAGCC TTGAGGCACA CATGGGCAGG GCAGCTGATC 180
TAGAGGAACA GGATGACATG GGAGAGGCCG GGTGGCTGGA GATCGTCCTA GGCATGTATG 240
TTTGAGAGGA AGGTTCCATA GATTAGATTC CCATTCAGAT GAAGAAGCTC ACCATGTGAT 300
CCTGGCCCAC AACCCAGGCG TTAAGTGTGA GATGCCAGTG CTGTCTCTTG GGGCAGACTT 360
AGAAACAATT CTTTATCTGG CAAGAGCTGC CTCTGCTTGG CCTGAGTGGA GGTCAGCTTG 420
TAGAACCTGG GGCCAGTGCT AATTGGCCCC CTGGAGTGCC TGTACACTCA CATAATGACC 480
ACTTGGGCCT CTGCCAACAC CATCTATATT CTTCAGCAAA GGCAAGGATA CTGGAAGAAC 540
CAGTTAGGGT GTGGAAGGCC CTTAGAATGT CCAGGCCTAA GGAGTGCTAG ACTCTTGGTT 600
CAGGGGCTCA GAAACAGAGC TAAGGTGAGG GAGGTAAAAA CAGATCACTG GGGCTCTCTG 660
GCCAGCCAGG CTAGTAAACT TGGCAGCCCC AGGTCAGTTG GCTAGTGCTT GAGGAAGGGC 720
AGCTGTTGGT TGTCCTCTGG CTGCCAAATT TATGTGTATA TACTGCGCTC CTGGACACAC 780
CCATACAACA GAGCTTCTGC ACACAGACAC GCCCACCTAC ATGCACACAG TGGTGAATAG 840
AGAAGGGTGA ATGACTCTGT ACGGCCATAT CCGGTCTGGG GTCCGGTCAG TAATCTCTGT 900
GGTCCACATG CTGGCTGGGA CCCTTCTACT GACTCTCAGG GCCCCAGGGT TTGCAGAGTG 960
CTCTGCATGT GATTGCTGCT CAGCCACATG GTCCAAATGG TTCCATTTCT TTCTAGCTCT 1020
GCCTGTTCCG GTGTCCTCAC TCAGGCTTGT TTCCACGGCA GCTCGTTCTC CCAGCTCTGA 1080
AGGCTGGGAG AGAAGAGTCA CAGTGCTGGG CTGTTTCTTG GGCACCCATG GAAGGTGCTG 1140
CTGTCGGCCA CTAACTTTCT GGTGTCTCCA GGCAGTCTTT GGCTTGTGTC CACATCTTTT 1200
CTTTACCTCT GACATCCTGT CTTTGTTGTC TGTCATCTCT GTGCGTCTCA CTGTGCAAGT 1260
CGTTAGACTC AGGGCTGATT 1280