EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM085-00565

Organism

Mus musculus

Tissue/cell

Kidney

Coordinate

chr1:75377340-75378680

Target genes

Number: 20
Name	Ensembl ID

Slc23a3	ENSMUSG00000026205
1810031K17Rik	ENSMUSG00000033159
Fam134a	ENSMUSG00000049339
Zfand2b	ENSMUSG00000026197
Atg9a	ENSMUSG00000033124
Ankzf1	ENSMUSG00000026199
Glb1l	ENSMUSG00000026200
Stk16	ENSMUSG00000026201
Tuba4a	ENSMUSG00000026202
Dnajb2	ENSMUSG00000026203
Dnpep	ENSMUSG00000026209
Des	ENSMUSG00000026208
Speg	ENSMUSG00000026207
Gmppa	ENSMUSG00000033021
Chpf	ENSMUSG00000032997
Tmem198	ENSMUSG00000051703
Obsl1	ENSMUSG00000026211
Inha	ENSMUSG00000032968
Stk11ip	ENSMUSG00000026213
Slc4a3	ENSMUSG00000006576

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr1:75378658-75378669	GCCCCGCCCCC	+	6.02
KLF5	MA0599.1	chr1:75378658-75378668	GCCCCGCCCC	+	6.02
Sox3	MA0514.1	chr1:75377710-75377720	CCTTTGTTTT	+	6.02

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

mSE_03786	chr1:75377427-75380074	Cerebellum
mSE_04888	chr1:75376234-75378656	E14.5_Heart
mSE_06697	chr1:75375788-75378645	Heart

Enhancer Sequence

AAGGTTTTAA AGCAATAAGG TCAGGAGACA CACCAGAGAA CAATGTGGTT CTTTATGACA 60
CAGTGGTCAA TAACGTAGTC AGAGAACCTA GGTTCCCTCA ACTTGTTAGC TCTGTGACCT 120
GGGACGAGTA ATGGCTTTGT GGGACAAGTA ATTGCTTATG GGAACTAAAT GAGTTACTCA 180
CACAAAGTCC TCGGCATAAC TTAGCCCAAT ATAGACCCAA GAAGGCCGTG CTTATCACTG 240
TGCTCTGAGC TGGGACTGAC ACCACCCAGT GCATGCTGGG ATGAGACCTG AAGTGATACT 300
AGTTTTCTTA GCCTCAGCCA CTTGTCAGTT AAACAAGGAT GGGAATACTC CTGAGAGTTT 360
CAGGCTCCTG CCTTTGTTTT GAATGAACTG GCAATTGTAA AGGGCCAGTT TACAAATGCT 420
AATGAAACCT AGCTACATTG TTGTTAGGAA AGGAAGCTGG AACTTTGTTT AGACACTGTG 480
TGTGCATGCT GCAGAATAAG GTGGGCTGGG CAGGAGCAAG GGACACACCA AAAATCTTGT 540
AAGTAGCTCA CTTGTGAGAA CATGAGTTGA CTTTGATTAG GAATATCTAT GAGCAACCTT 600
TGGCTGCGGT GGTGTGGTGT GTGTGTGTGT GTGTCTCTGT GTGTGTGTGT GTGTGTGTGT 660
GTATGGACAA ACAGATGGAT GGAGGGGAGG GGACATCACA GAAACATCCA GAAATTAGAG 720
CCAAGAGAGG CAAGCCCTTT TTTGAGGAGC CTGGGTCCAA GACAGCCCTT AGTCTCAACC 780
CAAGGACCTT TGCGCCGAGC ATGACCTAGG CGCCCCCACC CGGTGCTGTA CCCTGAGGTG 840
AGTTGGGTGC TGTCTGACAG AGTGCGTGTG CGCATGTTTG CGGAGTACGC CAGAGAAGAT 900
GCTGCTGGCC TTCCAGAGCC AGCCTGCAGG AGGAAAGGGG ATGCGGCAAG TAGGCCGCCT 960
CTCGCTGCCT ATGGAAGTGG CCTGAACTAA AGGCTACAGC ACCCCTTTCT GTGCCTCAGT 1020
TTCCCCATGT GCCTGGGGCC CGAAAGGCAG ATGTGGGGTG GGGGTGCAGG GTCTCAGCGT 1080
CGGGTGGTAT TTCGTGGGAG AGCTGGAGAG CAGGCGAGTG CTGTCCCAGG GTGGGCAGAA 1140
GGGCTGGAAA GGGAAGGGTC GCCAGGTGGG GCGCAGGCTG GCGGAGGAAG GGCGGGCTCT 1200
GGGCGCCGCC GCCTTCATCT TACCCCCACC TCGGCTCCTG AGGCCCGGCG GCTCCTTCCG 1260
CCACCCGCGC CGGCTCCTGC CCGCTCCCCA ACTCGCCCCC GGCCCCGCCT CCGACTCCGC 1320
CCCGCCCCCG CCTGTCCCCT 1340