EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM085-00514

Organism

Mus musculus

Tissue/cell

Kidney

Coordinate

chr1:74456010-74456800

Target genes

Number: 13
Name	Ensembl ID

Rufy4	ENSMUSG00000061815
Arpc2	ENSMUSG00000006304
Gpbar1	ENSMUSG00000064272
Aamp	ENSMUSG00000006299
Pnkd	ENSMUSG00000026179
Tmbim1	ENSMUSG00000006301
Gm216	ENSMUSG00000073650
Slc11a1	ENSMUSG00000026177
Ctdsp1	ENSMUSG00000026176
Vil1	ENSMUSG00000026175
Rqcd1	ENSMUSG00000026174
Bcs1l	ENSMUSG00000026172
Stk36	ENSMUSG00000033276

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

STAT1	MA0137.3	chr1:74456531-74456542	TTTCCTAGAAA	-	6.14
Stat4	MA0518.1	chr1:74456528-74456542	CCCTTTCCTAGAAA	-	6.81

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_07457

chr1:74453142-74461841

Intestine

Enhancer Sequence

GTAAGGCAAT TGGGTGGGGA CACATGGTGA CCACAGGTGG TTGGAGGGGA CAGGGTCCTT 60
GCTTCTCTCT GGCAGCCTGT GCTTTCTGTA GCACCTTGGT ATAAGTTTGG GGGTGAGGTA 120
AGGTGCTCTG AAACTCTGAA AGAAGCAAGA AGCCAGCAGG CTGTCTTGGG CCTTCAATGA 180
AGGAAGTTCA CAGACCCCCT TTCCTGTAAG TCACCTTCGC TTCATCTGTG TAGATTCCCT 240
GGGACCAAGG TGGCTCCTGG GACTCAGATT TCTACAATTA AAATCAGGAC AGTCCTGAGA 300
CTTGGACTCC GTGCCTGTAT TTACTACTTC TCTCTGGCTG CTCATTTCTG TGTTCATGTC 360
TTACACATCT GAAATGGTTT CTTTGTGTCA CCATTCCCCT GACACTCCTG GGAGGTCGTA 420
TCCTTGGCAC ATGTATCCTG GGATGTAAGC TGCAGCCACC AGGAGAGAGG GGGAGAGTCA 480
GGAGCTGTGT CCTAGGCCCT ATTAGGCCTG GACATCACCC CTTTCCTAGA AATGGCCCCT 540
CCATTTTTCG GTTACCATGA TCTATTTTAT ATCAGAGTGG GCAGTGAAAG CCAAACCTGC 600
CCAGAAGTTT GGGACTCACT CAGACCAAGG TTATCTGCTC AGAAATCCCC CTGTCACTTG 660
AGGTTGGGAG AATCTGCCTC TGGGGGCTTC CAGGTCTTGG TTAGCAGGAG GGTATCCTTT 720
GTATAGGGCA TGACCTAGTC TATGGTGTTA CTACATTCCT GTCCAGTTAA AAGCTGGAAC 780
TAAAACCCAC 790