EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM084-17602

Organism

Mus musculus

Tissue/cell

IPSC

Coordinate

chrX:70959470-70960130

Target genes

Number: 9
Name	Ensembl ID

Dusp9	ENSMUSG00000031383
Pnck	ENSMUSG00000002012
Slc6a8	ENSMUSG00000019558
Bcap31	ENSMUSG00000002015
Abcd1	ENSMUSG00000031378
Plxnb3	ENSMUSG00000031385
Srpk3	ENSMUSG00000002007
Ssr4	ENSMUSG00000002014
Arhgap4	ENSMUSG00000031389

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6	MA0677.1	chrX:70959745-70959759	GAGGTCAAAAGTCA	+	6.24
RXRB	MA0855.1	chrX:70959745-70959759	GAGGTCAAAAGTCA	+	6.27
RXRG	MA0856.1	chrX:70959745-70959759	GAGGTCAAAAGTCA	+	6.06
Rxra	MA0512.2	chrX:70959745-70959759	GAGGTCAAAAGTCA	+	6.18

Enhancer Sequence

TAAATAACGT TTAGCAAATC CTGGTTTTTT GGGTTGTTTT TTGTTTTTCG AGACAGGGTT 60
TCTCTGTGTA GCTCTGGCTG TCCTGGAACT CACTCTGTAG ACCAGGCTGG CCTCAAACTC 120
AGAAATCCAC TACCTCTGCG TCCCAAGTGC TGGGACTAAA GGCGTACGCC ACCACGCCCA 180
GCCTGTTTTT TATTAAAAGG GACTATAGCT TCCATCCTTC ATAGGCTGAG TAATGCTCAT 240
GAGCCTACTA AGCAATGCCA GTAGGAGTTA GCTAGGAGGT CAAAAGTCAG CAAATCGGCA 300
ACAATGTAAG CCAATGGTGC AAGTATTCAA GTTTCCACAC AATTATCCCC TACAGCCCTG 360
AGGCCCAAGG GTTGGCAAGA GAATATTACT CAAAAAAGTT GAAGTCAAAT CTTCTTTTGC 420
AAAAACCAGA AGACAGTGTG CACAGGAAAG CAAATGACGA GGTGACAAAG CCAGACAATG 480
TTCAAGATTG GTGATAAGAA AAAAAAAATC ATACTCCTGA CACCCTTACT CAAGACAGGT 540
TTTACTTGTT TCCATATAGC CTCAATTTCA GGGTCCACCA ATTTTGCACA CAGAAACTAC 600
AAGGTTCAGG GTTTGATAGC ACCCTCATCA TATGCTTGCT TTGTTGTTCC ACTAGCCATA 660