EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM084-16693

Organism

Mus musculus

Tissue/cell

IPSC

Coordinate

chr9:21550880-21551590

Target genes

Number: 13
Name	Ensembl ID

Carm1	ENSMUSG00000032185
Smarca4	ENSMUSG00000032187
Ldlr	ENSMUSG00000032193
Spc24	ENSMUSG00000074476
Kank2	ENSMUSG00000032194
Gm6484	ENSMUSG00000047822
Dock6	ENSMUSG00000032198
Ccdc159	ENSMUSG00000006241
BC018242	ENSMUSG00000040563
2310047B19Rik	ENSMUSG00000051238
Epor	ENSMUSG00000006235
Ccdc151	ENSMUSG00000039632
Prkcsh	ENSMUSG00000003402

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Lhx3	MA0135.1	chr9:21551288-21551301	AATTAATTAATTA	-	6.78
Lhx3	MA0135.1	chr9:21551287-21551300	AAATTAATTAATT	+	6.92
POU6F1	MA0628.1	chr9:21551289-21551299	ATTAATTAAT	+	6.02
POU6F1	MA0628.1	chr9:21551289-21551299	ATTAATTAAT	-	6.02

Enhancer Sequence

TTGGTAAGTG TTGCCTGCAG TGCTAACCTG GCCATGTCAC CTTTCTGACA AAAAATGGAA 60
TACCCCTGCC TGAGGGATGC CCCTGCCTGC CTCGAATCAC TGCCCCCTTC TCACTCATTA 120
CAAATAAGAT GGAGTGGAGT GTCCCTGGTG GTGGTGATGA AACACAACTT GAGTTTTCTC 180
AGGGCCAGCC TGGTCTACAT ACAGACTTTT AGACCGGCAA GGGAGTGGGG TAGACAGTGG 240
ATTTCTTTCT CAAAAAATAA TTGTGATCCT GTGTGAAAAA ATCATGGTGG TTCATACCTT 300
GAATCTTAGC ATCCAGGAAG CAGAGACAGG AGTTTGAGGC CAGTCTGGTC TACAGAGTGA 360
GTTTCAGGAC AGCCAGAACT ACACAGTGAG ACCTTGTCTC AATAAATAAA TTAATTAATT 420
AAAAAGAGCA AAGTTGACAG AGAATCTCAA AAGTTAGAAC CAGGGTCAGG CTATGGGGCC 480
CAGGCTGGCT CAGAAGTCAG CATCCTCCTG CCTCATTCCC CTGAAGTGTT AGACTCCCAG 540
TGAATGCTAT ACCAACACAC ACTCCCTTGG TTTTTTTCTT TGTATGATAG GTGAGTATAA 600
TTTTACATTC AAAACATATC GCTGTCACAT GAAAGGGCCA GGATGGACAT GCCGGTAGCT 660
TCACTGGCAC GGGGTCTCCT GAGAGCCCCT GACCAAGCCC CTCTCCCCAC 710