EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM084-12958

Organism

Mus musculus

Tissue/cell

IPSC

Coordinate

chr5:125999960-126002780

Target genes

Number: 5
Name	Ensembl ID

Scarb1	ENSMUSG00000037936
Gm10382	ENSMUSG00000072612
Ubc	ENSMUSG00000008348
Bri3bp	ENSMUSG00000037905
Aacs	ENSMUSG00000029482

TF binding sites/motifs

Number: 11

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

DBP	MA0639.1	chr5:126001776-126001788	TGTTACGTAACT	-	6.04
ELK4	MA0076.2	chr5:126000419-126000430	CCACTTCCGGC	+	6.62
Gabpa	MA0062.2	chr5:126000418-126000429	GCCACTTCCGG	-	6.62
KLF16	MA0741.1	chr5:126001541-126001552	GCCCCGCCCCC	+	6.02
KLF5	MA0599.1	chr5:126001541-126001551	GCCCCGCCCC	+	6.02
NKX2-5	MA0063.2	chr5:126001814-126001824	CTCAAGTGGT	-	6.02
POU2F2	MA0507.1	chr5:126000494-126000507	TTATGCAAATGCA	-	6.29
Pou2f3	MA0627.1	chr5:126000492-126000508	CTTTATGCAAATGCAC	+	6.16
ZBTB7A	MA0750.2	chr5:126000418-126000431	GCCACTTCCGGCC	-	7.04
ZNF143	MA0088.2	chr5:126000229-126000245	CAAGGCATTCTGGGAA	-	6.49
ZNF263	MA0528.1	chr5:126000556-126000577	TTCCTTCCCCCCCCCTCCCCT	-	6.36

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_04364

chr5:126000082-126001529

Cortex

Enhancer Sequence

AAGGCTAGAC ACCTCTAAGG GTGTCTGAAT TCCTGATTCT CTTGCCTCCG TAACTTAGTT 60
TTTATGTGTC GACAGAATTT GGGGCCCATG GGTCTAGTAG GCAAGTACTT CACAAACTGA 120
GGGCCAGGTA GGATTCCAAG ATAACTGCTC TGGCCCTAGT CACAGAAGCT GTGTTCAGAG 180
CCTGAAGAGG TGAGACATGG TCAGACATTT GCACTCTTTG GGGAAGGGGC CGGGGTCCCT 240
AGGTAGTCTC TGGTCCAGAA ATAGATCTGC AAGGCATTCT GGGAAAACCA TCCTTTAGCT 300
CTCCTACCCT GGGTGAATGA GGAGGAGGGA GCCGGGAAGG TGTTCAAGGC TGAACTTAAC 360
TGCATAAATG ACAAGGCAGA CATCAAGGCT GCTTTGGCCT GGCCAAGGAT GCCTCGAGAG 420
GCTTCTGACT CCTCTGTGAC AGGCACAGGG CTGGCTGAGC CACTTCCGGC CCTGCCTGGG 480
TGGCTGCCAC CTTCACTCTG GAGGTGGGAG ACATTAAAAA TCGGAAGCTA GTCTTTATGC 540
AAATGCACGC CGCCCCACTT TGTCTTAAGA TTTTAATTTT TCTATGAATT ATTCCATTCC 600
TTCCCCCCCC CTCCCCTTTC CCTGTGGAAG AAATCAAGAC ACCCAGTAGC TGATCAGAGG 660
AATTTTCCAA CCTTTCTGTT TTATTGCATA TTTTTCCAGG CCTGGACCTC CTCTAGTACC 720
AGGAAATAGT CGTCAGGACA GTTCCAGTGA TGTGTGGTTC GCACATCAAG CTTACATGAG 780
TGAGACCTCA TAGGAGAGAG GATGCAGGAG AGCAAAACAC CAGTGGCAGA GGAACAGCTG 840
GGTGGTCAGT TTGGGGAACC CTGAAGGATG TGAAGGTGCC AGCCGTGTGT GATCTGTAGG 900
GAGGATACTC TAGGCAGAGA GGGACTGTTG GTGCAAAGGC TGTAGGGCCC TCTTCCGGGA 960
CCAAGGCTGG GGATCTAGGG GCCATTTCTC AGTGACCATC CATTGGGCTG CATCTTGACC 1020
AGGTGCATCC TCCCCTCCAC CCTCCAAGCC CCCAGTAGGC GCTGTCCCGT GAAGTATCTG 1080
GAACTATTCT TTTTGTTTTG GAGCTAGTGT CTCAGTACCT CAAACTCAGC GATCCCAGGC 1140
CTCAGCATCC CAAGTGCTGG AATTCTAGAT GTGAGTTAGG GCACCCATTG CAAGCCCAGG 1200
GGTTTCTGAT CTGGGCCACA TGAGGCTGTG CTCCATTCTG TCAGCCCCGA GGGTGAGGGG 1260
CCAGGAGTCT GCGGGTTCCA ACAATTTCCC CAGGCATCCC TCTCTTTGCC TCCAGCCCTG 1320
TTAGTTACAG TGGCTCTCTG ACTCTGGGAG CAATTCTCTT CTGCCCAGGG TCCACAGAGC 1380
CTCTGTCTTG GCTGTGCAAT TCATGGGGCC TCTCTAATGC TGGCACAGTC CTACCCCAGG 1440
GTCTTTGCAC ATTCTGGCTC TGCATCCTGC AGCCTGTGAG ATTCCTTCCC TCACTCTCTG 1500
TTAAGACTTA CTCTTATGTC CCCCTTTTCA GTCCGTCCCT CCCATGCTTA AGCTCCTCCC 1560
TTCCACTCAA ACCCCGCCCC TGCCCCGCCC CCGCCCCTCC CGTTTACTAA TCTGCATTTC 1620
GTTTTCTTCT GACCTTCTTC TTTCTCCTGA CCCCTTACTC ATCCATGTGA CCACCTGCTC 1680
CTGCCCAGGG CGTCAGCCTA AGAAATTCCC TGTGATCCTG CACGGGTCCC TGGGGCAGAA 1740
CAAGGAGATT GACTGTTTAG GGAAGACTAC CTTGCACCGC CGCTGAGCCT CGTGGCTTCT 1800
TAGCAACCTC AGCAGTTGTT ACGTAACTGG CTGTAGAACT GTCTGCGACG GTTCCTCAAG 1860
TGGTTATATT GGGTGTTTAC AGCCTCTCTT TTCCCTCCTG TGAGTTCTCT TGAGCTCAGG 1920
GGACCAGGCT TGACTTTTGC AGAGAGACGG GTCTCCCTGC TGTGGTCCAA GAGTCCCTGG 1980
GGACCTTGGC CACAGCCCTG CAGCTTGGGC ACAGGCTCGT GGGGGAGGGG AGGTTTGTTC 2040
TGCCAATCTC AAGGGGGTCT GGGAAGCAAG GGCCAGAGTG GTAGTAGAGA GCAAAGGGCA 2100
CTGTCTGGGC CAAGCTGTGT TACCTCAGTC CACTGGCTTG ACCCCTCTGA TCCTCATCCC 2160
TGTCTGTAGA GTTGGAATAG ATCAAACACT CCTTTGAGGA AGTCACTGAG TGGAGGCATT 2220
CCTGGTACAA GGCCAGAACT TGTTGCAGGA GAGAAGGACC CTGTATTTCT TGAGTCCTGG 2280
CTTCTAGCTG AGCCTCCAAC AACAAACCCT TTTCTTGCCC AGTCCGCCCT CAGTGGGTTT 2340
CTTTTATACC TGTTTATAGA AACATTTCAA TTAGTGTTAA GTCCTGGGAA TAGAGAGGGA 2400
TGTAGGGGCA GCCCACATGT CACTGGCCTT GGTGACAAAA ATGGATGCTT TCTTAAAATA 2460
TCTCTTCTTT GTTCTATACT AATTGAGGCT GTTTATCTGT TTATTTATTT GCCTTTTCAA 2520
AACAGGTTTT CTCTGCGTAG CCCTGGCTGT CCTGGAACGC CTTCTGTAGA CTTAAACTCA 2580
CAGAGATCCA CCTGCCCATG CCTCCCGAAT GCTGAGATTA AAGGCATGTG CCACTACTAC 2640
CTAGCCTGGT CACTATTTAA TTCCAACTGG CCACTGACAA TAAAGATCCA GGGAGGTTAG 2700
TAGGATGGCC CAGCAGGTGA AGGTCCTTGC CAACAAGGCT GACCACCTCG GTTCGGTCCC 2760
AGGACCTACA TGTAGAAGTT GACTTCAGCA AGTTGTCCTC TGATCTCCGT TCTTGTGCAG 2820