EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM084-10906

Organism

Mus musculus

Tissue/cell

IPSC

Coordinate

chr3:116298510-116299040

Target genes

Number: 9
Name	Ensembl ID

Rtcd1	ENSMUSG00000000339
Dbt	ENSMUSG00000000340
Gm4596	ENSMUSG00000082394
Gm9761	ENSMUSG00000034437
Sass6	ENSMUSG00000027959
Ccdc76	ENSMUSG00000033439
Hiat1	ENSMUSG00000089911
Slc35a3	ENSMUSG00000027957
Agl	ENSMUSG00000033400

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EOMES	MA0800.1	chr3:116298863-116298876	CAGGTGTGAAAAT	+	6.02
TBR1	MA0802.1	chr3:116298864-116298874	AGGTGTGAAA	+	6.02

Enhancer Sequence

TCTAAAAACA AAACAAAACG TTCAGTGACA TATTTCGGTT CATCCGCACG TCAGTTTCAA 60
TCATTTAACC AACTCCCAAA ACTGGAAAAA TCAGGAATTC TGTACATTCA AAACATAAGT 120
CAACCCGTAA AGCCCTTCGT CGGACCCCTG GGGATACCTT GATCTTCACA GAGTTTACAC 180
TAGGGTATCT TATCGCACAG ATGAATGCAA ACTTGCCACA CTAACCACAG GCGATCTGAT 240
TTTTCCCTCT TTTACTAATA ACTTTTTAGT TGTTAGTTTC TGTGAACATT ACATTTTCTC 300
ATTTGCTAAA TTGATTTAAT ATGTCTAGCT GTTCATTTGA TTGCAATGAA GACCAGGTGT 360
GAAAATGTTT GTAGAAACTA AACGGTGAAA AAAATGTTGA ATTAAAAAAC AACAAAAACA 420
AAAAGAAGAC ACTGATGTAT TGAGTCGCTG GACTGTTAAA CTGTGGTATG CGATTTAAAA 480
TTAGGTCCAG AATCAACCAG CAAAGCAGTC AGAAAAATGG ACTTAAAACA 530