EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM084-10888

Organism

Mus musculus

Tissue/cell

IPSC

Coordinate

chr3:108364310-108365180

Target genes

Number: 12
Name	Ensembl ID

Sort1	ENSMUSG00000068747
Psrc1	ENSMUSG00000068744
Celsr2	ENSMUSG00000068740
Sars	ENSMUSG00000068739
1700013F07Rik	ENSMUSG00000027886
5330417C22Rik	ENSMUSG00000040412
Tmem167b	ENSMUSG00000068732
Taf13	ENSMUSG00000048100
Wdr47	ENSMUSG00000040389
Gm12517	ENSMUSG00000081499
Clcc1	ENSMUSG00000027884
Prpf38b	ENSMUSG00000027881

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr3:108364741-108364753	AAACAAACAAAC	-	6.32
Foxj3	MA0851.1	chr3:108364734-108364751	ACAAAATAAACAAACAA	+	6.12

Enhancer Sequence

GTATATCAGT CAGCTCACAG ACAGTTTCTA TGGATGCCTT TATGTCTTGC TCTTTTACTC 60
CTATAAGTTA AGAGACAATG CCAAAATTCA CAAGGAAATG ACATTTCAGT CTTCAGTGTC 120
ACGTCTATGG AAGTCTATGA GAAATACTTT CCCGAGCCTC TCCAATCATA GTACCTAGAA 180
AAGGCTTTCT TATTTCCGTT CCTGTAAGAC TGACTATAAA GGTCTTAATT CATGCTCTAG 240
AACCTGAAAA TCATGACTAT AAAATTGTTT GAAGCAATCT GGAAAAATTA CAAGTGCTCC 300
ATCACTAATA AAAGGCGGCT TCTAAATCCA CCCTTTGCGG TATTAGCCAG AAGCTCCAGA 360
TGGAGCCACC CAACTAGGAC TTTAGTCAAA CGAATGAAGG CTTTTTTTGG TGTCTTTTAA 420
ATTAACAAAA TAAACAAACA AACAAAAAAC TTTGGGGGTT GTCTACAATC ACCTCCCCCG 480
CAAACGGTGG GATTTGATAC CATTACTAAG TCCTTTCAAC CAGCTTACTG TCAGAAAGTA 540
TGAGACCTTA GGGAACTGGA TAACAGCTTC TCTCCCCTGG GGACTAACAA CATAATTCTA 600
TAGTGAACGA CCTCCCCAGC GGCCAGAACC AACTTCTAGG AAAGAAAAGA GAGTAAAGGG 660
TGATAACGAA AAGTCAGGTG TGGCACTAGG GTACCTTGAT GGGCTTGAGA AAAGAGAAAC 720
TGCAAGGAGC ATCCCAGACA GGAGTTAGGG GCTCCCCAAG GTCCAGGGGG GCCGGGCTGG 780
GAGGGGGCGG GGGGAACGGC CACGTCAGTC TAGCCCCGCC CGCCACGTTT GGTCCCAGTC 840
CTCTACCGCC ACCCTCCGCT CGGGCCCCCA 870