EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM084-10490

Organism

Mus musculus

Tissue/cell

IPSC

Coordinate

chr3:88135860-88136360

Target genes

Number: 21
Name	Ensembl ID

Nes	ENSMUSG00000004891
Iqgap3	ENSMUSG00000028068
Mef2d	ENSMUSG00000001419
1700021C14Rik	ENSMUSG00000010538
Cct3	ENSMUSG00000001416
0610031J06Rik	ENSMUSG00000001418
Tmem79	ENSMUSG00000001420
Smg5	ENSMUSG00000001415
Paqr6	ENSMUSG00000041423
Bglap	ENSMUSG00000074489
Bglap2	ENSMUSG00000074486
Pmf1	ENSMUSG00000028066
Slc25a44	ENSMUSG00000050144
Sema4a	ENSMUSG00000028064
Lmna	ENSMUSG00000028063
Mex3a	ENSMUSG00000074480
Rab25	ENSMUSG00000008601
Lamtor2	ENSMUSG00000028062
Ubqln4	ENSMUSG00000008604
Ssr2	ENSMUSG00000041355
Arhgef2	ENSMUSG00000028059

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3

MA0041.1

chr3:88135867-88135879

GATTGTTTGTTT

6.92

Enhancer Sequence

TTTTTTTGAT TGTTTGTTTC GAGACAGGGT TTCTCCGTGT AGCCCTGGCT GTCCTGGAAC 60
TCACTCTGTA GACCAGGCTG GCCTCGAACT AAGAAATCCG CCTGCCTCTG TCTCCCAAAT 120
TCTGGGATTA AAGGCGTGCA CCACCACGCC CAGTTAGAGG CCAATTCTTA AAGCTATTTG 180
GATGGAGAGT TTCAGAGTAA AGTAGCTTCA GTGAACACAC TAAATGACAA ATGAGGTTAG 240
AGTACGCAAG GCAATGGATT CAACACTATA CTAAAAAAAA GTCAAAAGCT CCCCATTGCC 300
ATGGCTCTGA GACCAACTGC TACCCAGTGT AGCTCAACAG ACAGCAAGCT CATCACTGCC 360
TGGTGCACAT CCAGAAACAC CCCACCCCGA CTCCCATCCC CGACCTCAGG TTTGCAGACC 420
TTCAGCTCCC TGGAGGATCT GGAATCATGT CTTCCTCATG CCTACCCCAG CCATGGCCAC 480
CCCAGCCCCC GCCCGACTCA 500