EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM084-10475

Organism

Mus musculus

Tissue/cell

IPSC

Coordinate

chr3:88097500-88099310

Target genes

Number: 20
Name	Ensembl ID

Crabp2	ENSMUSG00000004885
Nes	ENSMUSG00000004891
Iqgap3	ENSMUSG00000028068
Mef2d	ENSMUSG00000001419
1700021C14Rik	ENSMUSG00000010538
Cct3	ENSMUSG00000001416
0610031J06Rik	ENSMUSG00000001418
Tmem79	ENSMUSG00000001420
Smg5	ENSMUSG00000001415
Paqr6	ENSMUSG00000041423
Bglap	ENSMUSG00000074489
Bglap2	ENSMUSG00000074486
Pmf1	ENSMUSG00000028066
Slc25a44	ENSMUSG00000050144
Sema4a	ENSMUSG00000028064
Lmna	ENSMUSG00000028063
Rab25	ENSMUSG00000008601
Lamtor2	ENSMUSG00000028062
Ubqln4	ENSMUSG00000008604
Ssr2	ENSMUSG00000041355

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Six3	MA0631.1	chr3:88097813-88097830	AAGAGGGTATCAGCATT	+	6.29
Spz1	MA0111.1	chr3:88097816-88097827	AGGGTATCAGC	+	6.32

Enhancer Sequence

TGCTTCTTAA GTGCTGGTAC TACACGTATG AAACTACACA CATACATATT TTTTTTAGAC 60
AGGGTCTGTG TAACTCAGGC TGCTCTGGAA TTTGCAGCAA TATTCAGACT CTGAGGCCTA 120
GGTTTACAGG TGAAGATCAC CATGTTCAGC TTCTGATACA TGTGTATGTA TCATACATAC 180
GTACACATAC ATGTTTCTTC TGTGTGTGCT TGTGTATGTG CATGTATGTG GAAACCAGAG 240
GTCTACATCA GGTATCTTCC TCAATTGCTC TCCATTTATT TAGTTTCATG TGTATGGTGC 300
TCTCCGAGAC CAGAAGAGGG TATCAGCATT CAGAGCCTCT GAAACTGGAG TTATAGAAAG 360
CTGTGAGCTG CCATGTAGGG GTGCTAGGAA TTGAACCTGT GTCCTCTGGA AGAGTAGCCA 420
GTGCTCTTAA CCATCTCTCC TGTCCCTTCC ACTTTATTTT TTTCTTTTTT GTTTTATTGG 480
AGGGGTTGGT TCAGGTTTTC TCTGTAGCCC CTGATGTTCT GGAACTCACC ACACCCAGCC 540
TTGCTTTATT TTGCTGAGTA AGGGTCTCTC ACCAAACCTG GAACTTATCA TTTCAGCTAG 600
ACTGTCTCAT CAATAGCCAT CAGGGATCTA CCTGTTTACT CTATGTCCCT GCCTCCATAA 660
GTACTGGGAT ACAGACATAT GCCACCATAT CTGGCTTTTT TTTTTTTGTT TGTTTGGTTT 720
TTTTTGTTTT TCGAGACAGG GTTTCTCTGT ATAGCCCTGG CTGTCCTGGA ACTCACTCTG 780
TAGACCAGGC TGGCCTCGAA CTCAGAAATC TGCCTGCCTC TGTCTCCTGA GTGCTGAGAT 840
TAAAGGCATG CGCCACCACG CCCGGCTCAT ATCTGGCCTT TTATATGATT TAGAGGAGCC 900
ACACTCAGAT CCTCAGGTAT GCATAGCAAG GACTTTACCC ACCGAGCCAC CTCTGCAGTG 960
CCCCGACATA TCCTTTTCAA TGGTCCTAGG TAGCCAGTAT TAGCAGCATT GTACTTGAGG 1020
AATCCCATGT TAATAAAATT TGGTCAGGAT TCCACAACTG GCACATGGCA GTTGCATGGA 1080
ATTAAGCCAG GGTCTCTAGG CAGCAAAGCT GTGATCTACT TAGTGACACT TTACAAGTGC 1140
TATAAAAATA ACTCATCAAA GTCAGGTAGG TAGTACATGC CTGTCAACTC AGCAGCTGGG 1200
AAGGCTGTAG CAGGACTGTT TCGAGTTTGA GGACATGCTG GTCTATATAA CAACTCTTTT 1260
AAAAAGAAGA AAGAAGGAAA AAGAAAAGAA AAGAAAAAAA GCTGGACACA GTAGGTCATA 1320
CCTATAATCC CTGGGATGTG ACTGTTCTGG CAAAAGGGTT GTCTCAAGTA AGGATAGTGA 1380
GTTCCATAGC CAGCAAAGTT AAACCTATCT CCTTTACCCA AAAATATCCC ACAAGTACTT 1440
TCCAAGTAAC CAAGTAGCAG GCCACTGTTT AGTGGCAAAT GTTTAGTCAT TTCTGAAACC 1500
CTGAGTGAAT GGGGAAGGCT GGCTTCTGAG GGAGGGGACA CAGGGGCTGT GACACACCTT 1560
TTTCCTTAGT TTCATTTCTG AAACCCTGAG TGAATGGGGA AGGCTGGCTT CTGAGGGAGG 1620
GGACACAGGG GCTGTGACAC ACCTTTTTCC TTAGTTTCAT TTCTGAAACC CTGAGTGAAT 1680
GGGGAAGGCT GGCTTCTGAG GGAGGGGACA CAGGGGCTGT GACACACCTT TTTCCTTAGT 1740
TTCATTTCTG AAACCCTGAG TGAATGGGGA AGGCTGGCTT CTGAGGGAGG GGACACAGGG 1800
GCTGTGACAC 1810