EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM084-01871

Organism

Mus musculus

Tissue/cell

IPSC

Coordinate

chr10:127509210-127511270

Target genes

Number: 25
Name	Ensembl ID

Hsd17b6	ENSMUSG00000025396
Prim1	ENSMUSG00000025395
Naca	ENSMUSG00000061315
Ptges3	ENSMUSG00000071072
Baz2a	ENSMUSG00000040054
Atp5b	ENSMUSG00000025393
Rbms2	ENSMUSG00000040043
Gls2	ENSMUSG00000044005
Spryd4	ENSMUSG00000051346
Timeless	ENSMUSG00000039994
Apof	ENSMUSG00000047631
Stat2	ENSMUSG00000040033
Pan2	ENSMUSG00000005682
Cnpy2	ENSMUSG00000025381
Cs	ENSMUSG00000005683
Coq10a	ENSMUSG00000039914
Ankrd52	ENSMUSG00000014498
Obfc2b	ENSMUSG00000025374
Rnf41	ENSMUSG00000025373
Smarcc2	ENSMUSG00000025369
Myl6	ENSMUSG00000090841
Rpl41	ENSMUSG00000093674
Pa2g4	ENSMUSG00000025364
Rps26	ENSMUSG00000025362
Cdk2	ENSMUSG00000025358

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RARA(var.2)	MA0730.1	chr10:127510820-127510837	TGACCTATATATGACCT	-	6.97
Rarb(var.2)	MA0858.1	chr10:127510820-127510837	TGACCTATATATGACCT	-	7.58
Rarb	MA0857.1	chr10:127510153-127510169	TGAACTTAGGACCTTT	-	6.2

Enhancer Sequence

GAGGTAAGTT TTTTTAATTG CATTTTCTAC CCTGTTCCCA TAATATATTC TATATAATCC 60
TTTTAATCCC TTTTTTCTTT TTCCATTTTA ATGTGTATGG ATAGTTTTTG CCTGCATATA 120
TGTGTCTGTG CACCACTTGG GACATGGTTC CAAGGCAGAG TCTGAAGGTG GTGTCAGGGT 180
CCCTGGTAAT GGAGTTACAG AGGGTTCCGA GCCACTATGT GGTTGTTAGA AATCAAACCC 240
CAGCCTTCTG AAAGAGTAAC AGGTGCTCTC AACCACTCCT TGGTCACCCT TTTTGGTTTT 300
CTGGACAGAA ACCCATGTAG TCAGGACATG TCACAACTGC TTATAACTAT ATTTCTAGGG 360
GATCTGGTAG CCTTTATCAT GTCTGGACTG TTCAGGCACC AGGCTTACAT ATGATGGACA 420
AACATCTGAA GAGATGGTCT TAGGGTGAAG CGTTCCTTTG AGACAGGGTT TCTCTGTGTT 480
GCTCTGGCTG TCCTGGAGCT CATTCTGTAG ACCAGGTGGA TCTCTTGAGT TCAGGACAGC 540
CAGGGCTACA CAGAGAAACC CTGTCTCAGG GGATGGATGG GGAGGGGACA GTTACTGTTG 600
ATCAACTGGT AACCCTAACC ACTGAGCCAT CTCTTCAACT CCCCTAAAAA GAATTTAAAA 660
AAAAAAAAAC AGGACCATCA TGGTGTGCTG GATTTTTTGA GACGGGGTTT CTCTGTGTAG 720
CCCTGGCTAT CCTGGAACTC ACTCTGTAGA CCAGGCTGGC CTCGAACTCA GAAATCATCC 780
TGCCTCCCGA GTGCTGGGAT AAAAGGCACA AGTCACCACT GCCCAGCAAG AGACCATCCC 840
TCTTAGAGGT GATGGAACTC TTGGCTTTTT TTCTTTATTT TATGTATATG GGTACACTGT 900
AGATGTGCAG ATGGTTGTGA GCCACCATGT AGTTGCTGGG ATTTGAACTT AGGACCTTTC 960
TTTGGAAGAG CAGTCAGTGC TATTAACTGC TGAGCCATCT CTCTAGTCCA ACTCTTGGCT 1020
TTTTGCAGGA GACAGCATCT CTCTTCTCTG GCTGTCTGGA ACTTCTACGT ACTCCAGGCT 1080
GGCCCCAAAT TCACTGAGAT GTGCCTGCCT TTGCCTTCCA TATGCTGTGT GGATCAAAGG 1140
TGCAGGCCAC TGTGCCACCC TCCTTTCTCT ATTCTTTTTC CCACTCTCAC CCCCAAAAGA 1200
CTGCTATTGT TTTAGGGCTG AACATACTAT TCCTATTGTA TGTCTGGCTA AGGCTTGTTT 1260
GCATGGAAGC CAGAAGAGGC CATGGGATTG ATCCCCTAGA ACTGGAGTTA CAGATGGTTG 1320
TGGTCCTCAT CTGTGTGAGT GCTGGGAATT AAACCTTTAG TTATTGAACC GACTCTCCCA 1380
ACCCCACCTT CACTCTCATG CGCATCTTTC TAAGCTATCT TAGGTCCTGA AATCAAGGAT 1440
AGCATCAAGT ATTTTAAGTT TTTACTTTTC TTACAAAGTG GCATGTAAAG TTATTTCCCT 1500
TAAATTTAGA TATAAAACTT TCTCATATCG TCTAGCTAGT AGTCAGAGGT AGCAGAGTTG 1560
TTTGGGCTAC CCTAGGCTTA AGAATCACAT CTCAAAAGGT GCTTGTTGTA TGACCTATAT 1620
ATGACCTCCC TCACAGGAGT TTTTTCCTTA CCTACATTGG CTCCTTTACT GTGGGGGCCA 1680
TAAAGATGTC AGATTGCCCT GCAATTGTCA GAGCAGTACA CGAGTCATTT TTCCAGCTCA 1740
ACACATAGTT TTATCAGTTG CATTTTCTGC TATATGTAGA TATCTTCCTG GGTGAATTTA 1800
GCAAAAAAAA AAAAATTTTC CTATAGCCCG CCATATTGGC CGCTAGTATC GTTGAGGGTG 1860
ATCTTAAACT TCTGAATCTT CTTGCCGCCG CAACCTGTGT ACTTTCTCTT GTCTCACATT 1920
CAGCCTTTTA TAGAAAGAGC GTACTTAAAG GTTCTTTTGC ATTCATTCAT GAGAACTTAT 1980
GCTGTCCTAA AGGCCTATTC TGGGCTGCCA CCGCCTAGTA AAGCTGAATT TAACATTTTA 2040
AAGCTGATTT TTTTTTTCTT 2060