EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM084-00967

Organism

Mus musculus

Tissue/cell

IPSC

Coordinate

chr1:193218770-193220110

Target genes

Number: 8
Name	Ensembl ID

Tatdn3	ENSMUSG00000026632
Atf3	ENSMUSG00000026628
Nenf	ENSMUSG00000037499
Tmem206	ENSMUSG00000026627
Ppp2r5a	ENSMUSG00000026626
Dtl	ENSMUSG00000037474
Ints7	ENSMUSG00000037461
Lpgat1	ENSMUSG00000026623

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOS	MA0476.1	chr1:193219383-193219394	TGTGACTCATT	+	6.62
SOX10	MA0442.2	chr1:193218895-193218906	AAAACAAAGGA	+	6.32
Sox3	MA0514.1	chr1:193218895-193218905	AAAACAAAGG	-	6.02
ZEB1	MA0103.3	chr1:193220050-193220061	GCGCAGGTGGG	-	6.62

Enhancer Sequence

AATTACTAGC AGAGGAACTA AGAAGTACAA CACTAAGAAG AAGAAAACCA CGTTAGCAAA 60
TTAGATACAT AAGAAAAATG CTAGTATCGA GACTTCAAAC TAAAATTAAC AGGATAAACT 120
AATGAAAAAC AAAGGATAAA ATAACTCTTA ATTAAGTATA AAAGCTTAAA CCTCTGAGTA 180
GCAATTCACT ATCCTAACAG GTAGGACAGA GTTATTTTAG GCTATGGCTG CACTCCACTG 240
ACAGTGCTGT ATCAATTTGA ACAATTCTAG TATGGTAAAG AGCAATAAAG CAACAAATGA 300
GACACCACAC ACCTAACATA AACTATTTTC AAAAGTCTGT GTGATTCTAC CAGTGGTATA 360
TCCTTAATTC AGAAGCACCC CGAGAGGCAG ATGTAGAGTT TAAATGGGGT TCCAAGCTGT 420
TGCTGGTCAA CTGTTGATTT GATCTAGGGT TTTCTTTACA CTCCTTGCCA AACTAAGTCA 480
GGATTCATAG ACTCAAAGAC AAATCACAAC CAGATTGGCC TTGAAAGGGA TGCTGGATCT 540
TTGTCAAAAG AATTGAAAAA TCTGCTGATC ATTTATCTAT TTTGGCATGA GCCTTTCTTT 600
TATTTCTTGG CCTTGTGACT CATTCTCTAG GTTTCTATCA GGTTGCAAAG AATTTCTTAA 660
ATATCTAGGA ACATAAACAT CTTTTCCATT AATGACATCT AGCTCATAAA ATGCAAAGAC 720
GTAAAATTAT TAAATTAAAA GCCAGTAATT CTCAAAGAAT AAGCAAGAAC GCCAGTAAAC 780
AACTCATGAA AAGCCTCCAA ACCGGGTGAG AAAAGAGAGC CAAAAGGAGT GCCAAGCACT 840
CCTGCGAGGC ATTAGGCACG GATACCAATC TGAATTACTT ACAAAACCTT ACAAAGTCCT 900
TGGAAGCATA GCCGCGCTAA CCAAGTTCCC GTTCCACGGC AAAGAAATTA CTCTTCCTTC 960
ATAACCTCTC CAAAGACAAT CGAGGTCTTC TGAGGTATAA CATTTACGTC TAACGAGACA 1020
GTAAGATCTG TCACCTGGTC CCGGTTTTAA GCTAGTTCTA TATAGCTACG TCTAAAGGCC 1080
AGCTAACTCG GCAGCAGTTT GTTTGGACCC TGGATGTGAC AACTGAGGGA CAAACAGAGA 1140
AAGAGAAGAA CTAGCTAAGC TTGGAGAAAA CCAGGGTTGA GGCTCAGCGA GGCAGGGAGT 1200
CGAAAGACTG GACGAGGGAA GGGAGCGCAG GTACCTCTGG GGACCCTGAA ATCGCCAAGG 1260
CAAGGGCAGG CGGGGCAAGC GCGCAGGTGG GAAGGGGAGT AGGGCTTGCC CCGGGAGCGC 1320
GGGCCAGGGG CGGCCGGGGG 1340