EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM076-22195

Organism

Mus musculus

Tissue/cell

Hindbrain_E11.5

Coordinate

chr8:87124070-87125280

Target genes

Number: 17
Name	Ensembl ID

Zswim4	ENSMUSG00000035671
D8Ertd738e	ENSMUSG00000019362
Mri1	ENSMUSG00000004996
Ccdc130	ENSMUSG00000004994
Ier2	ENSMUSG00000053560
Trmt1	ENSMUSG00000001909
Nacc1	ENSMUSG00000001910
Lyl1	ENSMUSG00000034041
G430095P16Rik	ENSMUSG00000074203
Gadd45gip1	ENSMUSG00000033751
Dand5	ENSMUSG00000053226
Rad23a	ENSMUSG00000003813
Calr	ENSMUSG00000003814
Farsa	ENSMUSG00000003808
Syce2	ENSMUSG00000003824
Dnase2a	ENSMUSG00000003812
Prdx2	ENSMUSG00000005161

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZNF263	MA0528.1	chr8:87125070-87125091	ACCCCCTCCTCTCCCTCACTC	-	6.01
ZNF263	MA0528.1	chr8:87125061-87125082	CCTCCCCTAACCCCCTCCTCT	-	6.17
ZNF263	MA0528.1	chr8:87125149-87125170	CTCTCCTCTCCCTCCTCATTT	-	6.57
ZNF263	MA0528.1	chr8:87125146-87125167	TTTCTCTCCTCTCCCTCCTCA	-	7.14

Enhancer Sequence

AAACCACTTA GGCCCAACAA ATTACTTTCA TTGGCTATAT TGGGTCATTT GCCACCCATC 60
ACCAACCTCC GCTGATGCCC CCCTGGAGAG TCCTGGGCCT TGCCCACAGT TTCCAGCCAC 120
TGTCTCTCTT CACTAACAGC CTGGGAGGGA GGCCAGAGGC AGTGACTAGA CCTGGGTTTG 180
GAGGACAGGC AGGGCCCACC TAGGGAAGTC CAGGGGCCAA GAATAGCCTC ATCTCCCCAC 240
CCGCAGCAGC GGCCCCTTGG TAGGCCCTGG GCTGATCAGA GCTCACTCGC CCTGGGAGCT 300
GAGACCTTCC TGCTTCCCGC AGGCCTGGTC CCGAGACACC ACCCAGCCCC AGAAGCTGAG 360
AAGCCATCCC TGAGAGGGGG GAAAAGGGCC CCTAATGCAT CTTCTCCGAC TCAGCGGGCA 420
GCGAGGACTC ACCCTGCAGC CGAACAGCCC CAGCTCCCTC CCGTCCTCCC CATTCCCGCT 480
CGCCAAGGGG GTAAGAAAAG ATGCCCTTCC GCTTCTCCCC ATTGGCTCCA GCCGCTGCTC 540
CTCTGGGCCG TGGGGTGAGG TCAGGGCGGG CAGGAGCGGG TGGGCAGCTC GGCAGGGCAG 600
GGCAGGGCAG GGTGCCCGGT GAGTCCCAGG ACAGATGCAT TTCTGGCCCC GAGCGTAACA 660
TGCCCTCGGA ACCGCACTTG CCCCCTAGGC CTGCGTGTGC TGGTGCCCTT CCCCCACCCC 720
GCCCGTGTCT GTGCTTTGTA CTCTTGTGCT GGGTTCTGCA ACTTGACCCG CTTGTGTCCT 780
ATCGTCTCAG TGCATTTGGT TGTTGGGAGA AATAAAAACC ATCTCGATTT TTTTCCTGAT 840
TGGATGATTC GGATGTATTT TCTTTTCTGT GCTCTTTTGT TATTTCCTCC TGGACCCTGT 900
TCCTTTCTTT TCCTCCCCCT TCCCACACCT TTTCCCCACT TGTGAGTGGG CCTGGCTGGG 960
TGGGCTTAAG CTTTTGAGTT GATATCTCTT CCCTCCCCTA ACCCCCTCCT CTCCCTCACT 1020
CCTTTTTTAT TTATTTATTT TTTGAGTTCC CCTCTGCTCC ATTGCATTAA CGGTGCTTTC 1080
TCTCCTCTCC CTCCTCATTT GGGGTGTGGC TTGCTTTTTT CCTATTGGTT GGCTTCATGT 1140
AGGGGCCTCT GTGAGTGTTG AATACTCTAA GCTCCTCAGG GTGGGTGGAA GGTCACCTTT 1200
CTTCCTCATC 1210