EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM076-16281

Organism

Mus musculus

Tissue/cell

Hindbrain_E11.5

Coordinate

chr4:129713880-129714570

Target genes

Number: 9
Name	Ensembl ID

Ptp4a2	ENSMUSG00000028788
Gm12966	ENSMUSG00000070729
Bai2	ENSMUSG00000028782
Col16a1	ENSMUSG00000040690
Pef1	ENSMUSG00000028779
Tinagl1	ENSMUSG00000028776
Serinc2	ENSMUSG00000023232
Fabp3	ENSMUSG00000028773
Snrnp40	ENSMUSG00000074088

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Klf12	MA0742.1	chr4:129714091-129714106	GTTCAGGGCGTGGTC	-	6.12
Klf1	MA0493.1	chr4:129714295-129714306	GGCCACACCCA	+	6.62
MEF2A	MA0052.3	chr4:129714548-129714560	TCTAAAAATAGA	+	7.22
MEF2C	MA0497.1	chr4:129714546-129714561	GGTCTAAAAATAGAC	+	6.7
MEF2D	MA0773.1	chr4:129714548-129714560	TCTAAAAATAGA	+	6.27

Enhancer Sequence

TCTCTGATCT AATGCCAGAG AGGAGGGGTT GGGGCGGGGG TTAAAGGTGG GTGCTCAGTT 60
CTCTCACATC TGCCCCATGC CCCAGCACCC AGGCCCTCTA AACCTTGGGA CAGTGTGGAT 120
AGTTGATCAT GGGTGGGCAG GGCAAAGTTG GAAACAGGGG TAGGGTGGGG TGGGGAGGAG 180
GGCTCGCTTT CCATAAAGGA GAGCAACAGT AGTTCAGGGC GTGGTCGGTG AGGGCGTGGC 240
TATAGGGAGT CCTGGGGGCG TGACAGACAG CTAGGAGGGA TCTGGGTTCC TGAATCTGGC 300
AGCTCTCTCC GCTCTCAATC TCGCCCGCTC AGTAGCCAGG GCCCCTCCAG CCCTGGCCTT 360
CAGTCCAATA GACAAACACT TCAGCAACAG GAGGCTCCTG GCTTCACTTA ACAGAGGCCA 420
CACCCAGCTC TCTAGAACTG CCAGGCCTGG TGGGAGGGGG AGAGGGAACT CACTCATCCC 480
TGTCTGTGCC TGCGATGCAC CCACTACGTA GGAGATGACG CTCGCACCCT CGTGCTTCTA 540
TTCATTTCTA GGTGGACAGC TGGAGGGCCT CAAGGCTTGA GCCCTAGAGG AGGAGCTACT 600
CAGGCGCGGG CGTCTCAAGC TTCCTTCACC CTCCTTCCTG CTATTCTGTA CTCAGACCTG 660
GAGCCAGGTC TAAAAATAGA CGTAGGCGCT 690