EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM076-16125

Organism

Mus musculus

Tissue/cell

Hindbrain_E11.5

Coordinate

chr4:124479880-124480380

Target genes

Number: 12
Name	Ensembl ID

Sf3a3	ENSMUSG00000028902
Inpp5b	ENSMUSG00000028894
Mtf1	ENSMUSG00000028890
Yrdc	ENSMUSG00000028889
1110065P20Rik	ENSMUSG00000078570
Maneal	ENSMUSG00000042763
Epha10	ENSMUSG00000028876
Cdca8	ENSMUSG00000028873
Rspo1	ENSMUSG00000028871
Gnl2	ENSMUSG00000028869
Meaf6	ENSMUSG00000028863
Zc3h12a	ENSMUSG00000042677

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Gata4	MA0482.1	chr4:124480273-124480284	TCTTATCTCTC	+	6.32
RFX3	MA0798.1	chr4:124480049-124480065	TGTTTCCATGGAGACC	+	6.03

Enhancer Sequence

CGCGGAGGTA AAAGCAGAGG CTGGACTCGG CTGGGGCTGG AACTATCCGG GGGGTGCGGG 60
ACTGGGGCTC CCTGCCGTAG CCATTCCCGG CTGAGACTTC ATTCCACTCA CCCGAGGGAC 120
CCCACCCCTC CTCCGTTTCC ATGGGGATGG GTATCCAGCC CCCCTTCTCT GTTTCCATGG 180
AGACCCGGAC CCTGCCCCTC TTAGCCCAGC TCGTAGCCCC CAGACTGCCT CGGGGTTTTT 240
CTCTGTAGCC CTGGACTAGG GGTGCTTTCC CGGTCAGGGT CCTCATGCTA GTCTCTCAGA 300
GGTGCTGGGT TCGCAGTCCT CGGCCACCCT CACACCTCCT GGTCTTGTTA CAGAAAGTTG 360
GTCTCTGCGT TTCCCGGGGC AGCCCACCGG GTCTCTTATC TCTCCTCTCA GACACCGAGA 420
AACGTGTATT TCTGGGGTTG CGTAAGCAAA GGTTCGGGCT GGTTCCTCTC AGATTAGATC 480
CCTTGACCTG TGCCTGGTAA 500