EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM076-13743

Organism

Mus musculus

Tissue/cell

Hindbrain_E11.5

Coordinate

chr2:165239420-165240300

Target genes

Number: 10
Name	Ensembl ID

Cd40	ENSMUSG00000017652
Cdh22	ENSMUSG00000053166
Slc35c2	ENSMUSG00000017664
Elmo2	ENSMUSG00000017670
Zfp663	ENSMUSG00000056824
Zfp334	ENSMUSG00000017667
Ocstamp	ENSMUSG00000027670
Slc13a3	ENSMUSG00000018459
Slc2a10	ENSMUSG00000027661
Eya2	ENSMUSG00000017897

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GATA5	MA0766.2	chr2:165239911-165239921	TCCTTATCTG	-	6.02
Gata1	MA0035.3	chr2:165239911-165239922	TCCTTATCTGT	+	6.14

Enhancer Sequence

CACACCCCAG CAAAGTCTAT AGCATTAAGG CATTTTCTGC AATTTGCAGA GTTCTGTGAG 60
AGGCTGCACC AGCCATTCCT TGCTACAGGG AGCACAGGGC AGCTGGTGCT CCCTCAAGCC 120
ATGGTCTGGC ACACTGTGAG AGCCTGTTAA TGACCAGGCA AGTGTCCAGT CAAGAGCTTC 180
CTGTGGCCTG GCCTCTGAGT GAGAGGACCC TTGCCAACCA GTGCCTTGAC TTGGGCTCCT 240
AAATGGAAGG CATCTTCCTC TTCCCAGCTC CCTACGGTTC TGCTGGGGAC ACTAAAGGGG 300
TTTCCTCCAG CCCTTTTCAA TTCCCCGAGG AACTATGGTC TTGGTTTCCT TAGAAACACA 360
GCCCTCAGAA TTCTCAGGGA GGCCAGAGAC CAGCAGTAGC CAGAGGCAGC ATGGGGAGAG 420
CTAAGGGACT CTGCTTAGCT GGGTTAAGTG TGCTGCCCAG CTAACTCTTT CACCTTCCCC 480
GTGCCTCAGT TTCCTTATCT GTAGGCCAGA GGTTATAAGG GAGAAAAGCA GCCTACAGAT 540
CGAAAATACT TAGCACTGTG TCTGGGCACC ATGAGTGCTA GTGGTCAGAG GTCGCTCGAG 600
GTCACCTGAT GCCTGGGGGT GGGGGGACTC AGAGCTGATT GACACAGTGG CTGTCAGACT 660
CCAAAGGTGA CCAGCAGACC CCAGGTCACT TTGCAGAAGT GAATGGGGGG AGACTAAGCT 720
TTCAGGGTGT TGTTGTTCTT CCTCCTCTTT CCTTCAGCCA GACCCTCTCT CCGTGCTCTC 780
ATCTACACAT AGTGTGGCCA TGTTTCTTAA GGACAGTTCA AGTCCAGAGC TCAAAATTCT 840
AAGTCTCCGA GGGACTAGAA GATGCATAGT CAGACAGACA 880