EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM076-04720

Organism

Mus musculus

Tissue/cell

Hindbrain_E11.5

Coordinate

chr11:120695190-120695880

Target genes

Number: 18
Name	Ensembl ID

Mrpl12	ENSMUSG00000039640
P4hb	ENSMUSG00000025130
Arhgdia	ENSMUSG00000025132
Alyref	ENSMUSG00000025134
Pycr1	ENSMUSG00000025140
Notum	ENSMUSG00000042988
Aspscr1	ENSMUSG00000025142
Lrrc45	ENSMUSG00000025145
Dcxr	ENSMUSG00000039450
Cbr2	ENSMUSG00000025150
Rfng	ENSMUSG00000025158
Gps1	ENSMUSG00000025156
Dus1l	ENSMUSG00000025155
Fasn	ENSMUSG00000025153
Slc16a3	ENSMUSG00000025161
Csnk1d	ENSMUSG00000025162
Gm11793	ENSMUSG00000082510
Hexdc	ENSMUSG00000039307

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Crx	MA0467.1	chr11:120695240-120695251	CTAATCCCCTT	-	6.32
Foxd3	MA0041.1	chr11:120695657-120695669	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr11:120695661-120695673	GTTTGTTTGTTT	+	6.32

Enhancer Sequence

AAAGGTCCCA TTGAGAAGCA CACAGCAATC ATCACATTTA GAACTTTAGC CTAATCCCCT 60
TCGATTTAGG AAGGATACAA GACAACTACT GTCACCACTG CTGTTACCAT GGTGCCGGGA 120
GGCCCAGCCA ACTCTTTAAG AAAAGGAAAA GGGGTGTATG GCCTGGAAGA GAAGAACAAG 180
GAAGACTGCA TCATCTACTT AGCAGGAGAG AGAAGCAGAG CCAAACTGTG AAGGGGCTCA 240
GAAAGGCAAG CAGCCCCACC CACACTCCAG GCCTTTTCTG AAGAAGCTGT AAGAGCCACC 300
ATTTTAGGAA CAGCAAAATT GAAGTGGCTG CTACCACCTT GCAATAAAGT TTTCCTGGCA 360
GTGCCCCAGG TGCAGTGTCT GGGCCTGAAT GGGAAGGGAA CACACCTCGG GGCCAGGTAC 420
CTGCCCCGCA ATCTAGGAAG TCAATTGCTT TATACCCTGG GTTTTTTGTT TGTTTGTTTG 480
TTTTAAACGT TTTTTTTTTT TTTTTTTAGG TTCTGTTTCT TCACACTGAA TATCCATAGC 540
AGACTTTCAG TAAAGCTATT GGGGGTGGGG GTGGGGGTCA GGCTCCTCTA CTGGATTTGT 600
CCCTTGGAGT CTACTACAAC TCCCATGATG CTGAAGCTCC TGGCATGCTT GTCAGCAATA 660
ATGGCCTCCC TTGGTGTCCC TAAATGCCAC 690