EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM076-01279

Organism

Mus musculus

Tissue/cell

Hindbrain_E11.5

Coordinate

chr1:173118960-173119470

Target genes

Number: 20
Name	Ensembl ID

Atf6	ENSMUSG00000026663
Fcgr3	ENSMUSG00000059498
Sdhc	ENSMUSG00000058076
Mpz	ENSMUSG00000056569
Pcp4l1	ENSMUSG00000038370
Tomm40l	ENSMUSG00000005674
Apoa2	ENSMUSG00000005681
Fcer1g	ENSMUSG00000058715
Ndufs2	ENSMUSG00000013593
Adamts4	ENSMUSG00000006403
B4galt3	ENSMUSG00000052423
Ppox	ENSMUSG00000062729
Usp21	ENSMUSG00000053483
Ufc1	ENSMUSG00000062963
Rpl27	ENSMUSG00000079137
Dedd	ENSMUSG00000013973
Nit1	ENSMUSG00000013997
Pfdn2	ENSMUSG00000006412
Klhdc9	ENSMUSG00000045259
Pvrl4	ENSMUSG00000006411

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ESR2	MA0258.2	chr1:173118986-173119001	AGGTCAGCCTGATCT	+	6.35
PPARG	MA0066.1	chr1:173118984-173119004	CTAGGTCAGCCTGATCTACT	+	6.29
RREB1	MA0073.1	chr1:173119051-173119071	ACCCAAACCAACACCCCCAA	+	7.46

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_06951	chr1:173117988-173120959	Heart
mSE_10951	chr1:173117419-173121622	Olfactory_bulb

Enhancer Sequence

TTGGTTTTTT GTTTTTTGTG AGCCCTAGGT CAGCCTGATC TACTGAGTTC CAGGACATCC 60
AGGGCTTCAC AGAGAAGACC CTGTCTCCGA AACCCAAACC AACACCCCCA AAACAATCCC 120
CCTTTGTCTT TATATTGACA TAAATCCAAG GTTTCACAAA TTCCATTTTC AGGAAGAAAA 180
GGGAGCCGGA GTTATTTTTC CAGGTGGTGG GTGGTAAGAG GCTTTGTTCT TAATCCCCCA 240
TGAGGGGTTT CTATGCTGAC GAGACCCCCC CCCCCCAGTG TTCAATGGAA GCCACTGCTA 300
CCCGCCTTAC AGAAGCCTCT GGGATCCCGT GCCCCTGTGC GACCCCGGAC TGCTGTTTTT 360
GGAGATCTGT TGGAACTGTT TCAACTCTTT CTGCGCAGTA ACCAGCTGCA GTCCTCAAAC 420
AGCTTCAGAA AGGCTTGCTC AAGGTCACCC TCAAGATAAC AACAGAAAAA GAACTAGGAA 480
CCCTTCCCTG AGTTTCTCCA TACGCACATT 510