EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM076-01086

Organism

Mus musculus

Tissue/cell

Hindbrain_E11.5

Coordinate

chr1:155580110-155581040

Target genes

Number: 7
Name	Ensembl ID

Dhx9	ENSMUSG00000042699
Rgs8	ENSMUSG00000042671
Rgs16	ENSMUSG00000026475
Rnasel	ENSMUSG00000066800
Gm5531	ENSMUSG00000043282
Glul	ENSMUSG00000026473
5830403L16Rik	ENSMUSG00000045968

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Myog	MA0500.1	chr1:155580568-155580579	GACAGCTGCTG	+	6.14
Tcf12	MA0521.1	chr1:155580568-155580579	GACAGCTGCTG	+	6.02
ZIC1	MA0696.1	chr1:155580521-155580535	GGCCCCCTGCCGTG	+	6.14
ZIC3	MA0697.1	chr1:155580521-155580536	GGCCCCCTGCCGTGC	+	6.11
ZIC4	MA0751.1	chr1:155580521-155580536	GGCCCCCTGCCGTGC	+	6.23

Enhancer Sequence

GGTACTGCAA TTAGACAGCC TGGGATCAGA GCTTGGTCCT TCTGTCTGTT CCTCAATTAA 60
CCTCTCCGTG CCTCAGTTTC CCCGACCTGA AAACCACAAT CCCCGTGCCT CCTTCAGAGG 120
CTGGGGGAGG GTTCGGTGCG ACTATGAGAA GCGGGGCATG GAGAACTCAG ATGTACCGTT 180
CACTAAACGC TCACAGTCAC CATTATTAAC ACTGTAGCCA GGCAGTTGAA GAAGCCTGGG 240
GATTTGGATC CAGAAGGTTC CCTGGTGGCC TTGGAGCAGC TGAGCCAGCT GCTTGCTGGT 300
GGGTGGGGAG GAGAGGCTCA GTCACACAGC TCCCCGCGTG TCATGTCGCC CCTGCTCAGA 360
TGTGTGGGGC CCATTATGGA AAGCTCATTT CTTTCTCTGC AAAACATCAT GGGCCCCCTG 420
CCGTGCTCCT CCCTCTGTCC ACCTGGGCCT GTTTCTGGGA CAGCTGCTGT GTCAGGGGCG 480
GATGGCCTGG GAGCTGGTGA AAGGCCCACC TGTTCCTGTG GCTCACTCCC GCCCTCCCCC 540
TCCCCGGCTG CCAGACCCAG CCTCCCGGCT GCTCACACAT CAATCCACGT TTTTGAATCC 600
CTCTGCTCAG GTGTTGTGGG CGCATTGAGA GAGGCACGTT TGCTTACAGC TGGTCGCAGC 660
ATCATGACCA GCACAGGGGC TGTGTGGGGA GTCTCTGCTT TCCTGTGAAA CCTGTGCCAC 720
CGTGTGCCAG CCCTCCTCAT CCCTCATCCC ACTTTCCCTG TCAGGGGAGT GATGGCTCCA 780
ACATGGAGGG GGTGTCGTAC AAGGGTCCCT GGCTCTCAGG GCAAGGGTCC CTGACTCTCA 840
GGGCATGGCC CTCCAGTGCC TCTTGCATTA TGTCTGAAGA TGCCATTGAT AATCATGCTG 900
GCGCTTGCTG TTCTCCTGCC CCAGCCGTGG 930