| Tag | Content |
|---|
EnhancerAtlas ID | MM076-00861 |
Organism | Mus musculus |
Tissue/cell | Hindbrain_E11.5 |
Coordinate | chr1:134285720-134286470 |
Target genes | | Number: 11 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CTCF | MA0139.1 | chr1:134286152-134286171 | CAGCCAGCAGAGGGAGGTC | + | 6.3 | | Nr2f6(var.2) | MA0728.1 | chr1:134286165-134286180 | GAGGTCGAAAGGTCA | + | 6.92 | | RARA | MA0729.1 | chr1:134286165-134286183 | GAGGTCGAAAGGTCACCC | + | 6.12 | | Rarb | MA0857.1 | chr1:134286164-134286180 | GGAGGTCGAAAGGTCA | + | 6.82 |
|
| | Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
| mSE_03609 | chr1:134285724-134288828 | Bone_Marrow | | mSE_04094 | chr1:134284087-134288215 | Cortex | | mSE_06071 | chr1:134283900-134288225 | E14.5_Liver | | mSE_06983 | chr1:134283941-134288817 | Heart | | mSE_08541 | chr1:134284063-134288148 | Liver | | mSE_09006 | chr1:134283971-134288852 | Lung | | mSE_11086 | chr1:134284178-134287026 | Olfactory_bulb |
|
Enhancer Sequence | CCACACTCCA ATATCCCTTG TTCCTTTCTT CAGAAAAGTT AAGTGACATG TCACATTTTG 60
GTAGCCCTGA GTCACATCTG GTAGAGAGGT CTCTGTCCTG CAGTAAACAT GTTGTGATGA 120
GACAGACAGA GATAAACAGG CAAGTGCTCT GTGAGTCTCC CCGTGCTTGC ATAAGCTTGG 180
ATCCACACTG CCTGGGCTAT ATAGAAGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT 240
GTGTGTAAGG GTCCTCAATT CTCAATTCCT CCTCAGGACG GCTCAGCGGT TAACATATTG 300
TAGTCAAGTG CAGTGCTATC GCTCTATCTG CCCCTGTTCA AAATGAATGT CATCAAAAAA 360
GATGACACAG GAGGGTACAG ACAAGGAGCC TTGGGCAGCT TTATAGACAC AGAAACTACA 420
GCCCCCTTAG CACAGCCAGC AGAGGGAGGT CGAAAGGTCA CCCCCTGTTC CTCTCGGCAG 480
CATTAAAGGG ACTTACCATC TCAGTTAAAA CAAAAAACAT GTCACTTGGG GGAGGGAGTG 540
ACACTTCTTG GAGCCTGAGG GAATCACAAG CTTTGTGAAG AAAGCCTAGG TGTTCAACTA 600
GTCCATCATT ACACATAAGG TGGGTGGAAA GAGGTCAGGT TTGCAAAACT TCCACAAAAA 660
TTTAAAAGTC CCACAAGGAG TGAGTGGGCT CTCTTCCCCA AGGGACAACA CACACACACA 720
CACACACACA CACACACATA AAGCACACAT 750
|
