EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM076-00854

Organism

Mus musculus

Tissue/cell

Hindbrain_E11.5

Coordinate

chr1:134221940-134222620

Target genes

Number: 13
Name	Ensembl ID

Slc45a3	ENSMUSG00000026435
Elk4	ENSMUSG00000026436
Mfsd4	ENSMUSG00000059149
Lemd1	ENSMUSG00000079330
Gm10188	ENSMUSG00000066936
Gm7241	ENSMUSG00000089808
Klhdc8a	ENSMUSG00000042115
Nuak2	ENSMUSG00000009772
Tmcc2	ENSMUSG00000042066
Dstyk	ENSMUSG00000042046
Rbbp5	ENSMUSG00000026439
Tmem81	ENSMUSG00000048174
Cntn2	ENSMUSG00000053024

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZNF263	MA0528.1	chr1:134222557-134222578	GGAGGAGGGGGGGGAGGGGGG	+	10.92
ZNF263	MA0528.1	chr1:134222554-134222575	GCAGGAGGAGGGGGGGGAGGG	+	6.71

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_04508

chr1:134222404-134223832

E14.5_Brain

Enhancer Sequence

TTTGGAGTTG CAAAAGCCGC ATTTAAAACC CTGCCACGTG ACACAGGACT TCTCCCGTAA 60
TCCATCTATA TCACAGGGCG GTTGCAAAAA TCCAACTGCA TACTGTCACC GAGTACTTTG 120
TAAGTGGAAA AGCCAGTAGT TTAGTTTATG TCTTTGTAGT GTGGCTGGGG TCCTACCTAG 180
AATCCCATAC TTGCTAGGTA AGTGCTGTAA ATTGAGCTGC ACCCTCATCT CAGACTGCAA 240
GCCTTTTGTT GTTGTGGAGT TTTTCCCTAA TAGCACTGCC TCCCAACCCC ACGAGATCCT 300
TAGCCACCCA GGAGAGGCTG AAAGGCCGGA GTCTGCACCT GTCTCAGGTG TGTGGGTGCT 360
GCTCAATGCT CCTCTGTTAG CCAGGCCTCC CAGAGTCGCC TTGTGTCCCT GGATCACTCC 420
TGCAGGGGTT TACTCTTGCC TCTCTTACCT CTCTTCTGAC ATCAGTTCTC GCTTGATCAC 480
TCTGGCTGCC CTCTTCCCTG CAGCCCAGAC AACAAAGTGA GCAGGAGGGG TGCCCGGGAA 540
GAGAATGCCC CTCCCACGTA CACCTGTCTG CTTCAAGTCT TTATGTAACT TCAGTAACCC 600
GCATCACAGG GACAGCAGGA GGAGGGGGGG GAGGGGGGAT CCTGTAGACT TGTCTGGAGT 660
GGTTTTCTTT TGTCTGAAGA 680