EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM076-00681

Organism

Mus musculus

Tissue/cell

Hindbrain_E11.5

Coordinate

chr1:94595570-94596850

Target genes

Number: 4
Name	Ensembl ID

Gpc1	ENSMUSG00000034220
Dusp28	ENSMUSG00000047067
Rnpepl1	ENSMUSG00000026269
Capn10	ENSMUSG00000026270

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Klf1	MA0493.1	chr1:94595937-94595948	AGCCACACCCA	+	6.14
PKNOX2	MA0783.1	chr1:94595803-94595815	TGGCACCTGTCA	-	6.37
TGIF2	MA0797.1	chr1:94595803-94595815	TGGCACCTGTCA	-	6.04

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_00639

chr1:94595535-94605463

Myotubes

Enhancer Sequence

AGCATCTTTC TAGGCTCCTC GCCCTATCAT GGCCCCCTTC TCTCCTTCCT GCAGGGCCTG 60
TTCAGGCCAG ACCCTAAAGC CAAGAGGACA GAAGCACGTG CTGGCCGTGA AAGAGGCCTG 120
CTGGGGGCAG GTCAGGGAGC GGCAGCTCAG CAGGACTGTT TGTCCTGGTC CTTGGACTTG 180
ACAAGCTGCT GACAGGAGGC AGCTGGTTCC CAGTGACAGG CAGACGGGGG CGGTGGCACC 240
TGTCATCCTT TCTGCCCTGC CTGCTGAGCT GAGCTGAAGT AGCTGCCTGT TTGGGAGGAG 300
CAGTGGCTCT CCCCACGGGC TGCAGGGTCT GCCATGCTTA GGCTTGCAGT GAGAGGGCGG 360
AGACCAAAGC CACACCCACT GTCTCACAGC CTGAATGGCC CCGTGCCAGG CTGTGGTTGC 420
ATACGCAGCC CCTAGCATGC CCTACCCCAC CAACTATACC AAGAGACTCA CCAGCTTGGA 480
GCCCTGGGGA GGTGCTGTCT GTGCTCCTGG GTGTTTGCAG CTGTGAGCTG GAGGAGGTGT 540
GGAGCTCAGG TCAGATGAGC AACATGAAAA GGCACCCTAG GTCCTATTAA GTGGCCCCGG 600
TTCCTTTTGT ACCCCCTTTC TTTTATCCCT CTATTCTAGC CTCTTTAATG AATGACAGTT 660
GCTCTGCTAG AGCTTAGCTC TAGATGTCCC AGATGTGTCA TCGAGACTGT GGTCTTGGGG 720
TGGTCCTAGG ACAGGTCACC AGTTTCTGTC CCTCAGGGAT TCAGGGACAC TTGCTCAAGT 780
TCAGCACTCA GCTCTTCCCT GGTCCTCCAT AGCGTTCCCT ATGCATAGTC AGTCTTCTTA 840
GGCGCTCCAT CCAGAGCACA GAACTCTGGG AGAGAGCTCA GAGCCACAGA ACCTCCTGCT 900
GTGCGCTGGC CAGACTCAGC CAATACAATC TCCATCTCAG CGGCAGGCCA GGCTGCCCTC 960
CTTTTGCCTC CTCAGCAAGA TTCAGAGAGC TGCTGTCTCC CATCAGGAAA GACAATGTTC 1020
CTATACGGTC TCTCCTGCTA GTCCTTTTGC TTGGAAAACG TTTCTTTAAA GCATAATCTT 1080
ACTCTGCAGC CCTGGCTGAC CTGAAATGCC TTATGTAGGC CAGGTTGCAC CACCCTCCCT 1140
CACAATTCAT AATGTAGACC AGGCTGACCC AAAACTCCTA ATGTAGACTA AGTTGGCCCA 1200
GAACTCTTTA TGTAGACCAG GCACCCTTTT AACATGCAGA AACCCTTCTG CCTTTGCCTC 1260
TTGAAATAAC AGGCTCATGC 1280