EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM076-00661

Organism

Mus musculus

Tissue/cell

Hindbrain_E11.5

Coordinate

chr1:93263220-93263630

Target genes

Number: 10
Name	Ensembl ID

Lrrfip1	ENSMUSG00000026305
Ube2f	ENSMUSG00000034343
Gm7785	ENSMUSG00000083064
Scly	ENSMUSG00000026307
Espnl	ENSMUSG00000049515
Ilkap	ENSMUSG00000026309
Hes6	ENSMUSG00000067071
Per2	ENSMUSG00000055866
Traf3ip1	ENSMUSG00000034292
Asb1	ENSMUSG00000026311

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EOMES	MA0800.1	chr1:93263427-93263440	AAGGTGTGAAATG	+	6.92
KLF4	MA0039.3	chr1:93263611-93263622	GGAGGGTGTGG	-	6.32
Klf1	MA0493.1	chr1:93263613-93263624	AGGGTGTGGCT	-	6.02
TBR1	MA0802.1	chr1:93263428-93263438	AGGTGTGAAA	+	6.02
TBX21	MA0690.1	chr1:93263427-93263437	AAGGTGTGAA	+	6.02
TBX2	MA0688.1	chr1:93263427-93263438	AAGGTGTGAAA	+	6.62

Enhancer Sequence

CGCCGGTAAG ACGCAGCCGC GCCCCACATC TTCCTGTCCC GGGGGGCCCT AAGACGGTGG 60
GGAAGGTGGC ACCCCTTGCT GCGCAGTGTC CAACACTGGG GATACGTCGC TCTCAGGGGC 120
TCTGTGAGAC CCAGGGTTGG GTGGATGCGT CCTCTGTACC GTGGCTTTGG CGGCAGAACT 180
CCACTAGGCC AGTAGGAGAG ATTGGGAAAG GTGTGAAATG CAGTTAACTT GCTCCTCGTG 240
AAACTGGAAG ACTGGTGAGA GAGCGGGGCT CCCAGATCTA GTTCCTTTTT GTTAGGTGAC 300
TGCGTCTGGG AAAGGAGTGA TGTAACCAGG CTCTGCCTGC GATCCCTCCC AAGATCTCCA 360
CCTGAACTGC TGGGGTGGAG ACGCAGGCTG GGGAGGGTGT GGCTAGAGGC 410