EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM076-00527

Organism

Mus musculus

Tissue/cell

Hindbrain_E11.5

Coordinate

chr1:78533960-78534340

Target genes

Number: 7
Name	Ensembl ID

Pax3	ENSMUSG00000004872
Farsb	ENSMUSG00000026245
Mogat1	ENSMUSG00000012187
BC035947	ENSMUSG00000090486
Acsl3	ENSMUSG00000032883
Utp14b	ENSMUSG00000079470
Kcne4	ENSMUSG00000047330

TF binding sites/motifs

Number: 7

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

BHLHE41	MA0636.1	chr1:78534131-78534141	GTCACGTGAC	+	6.02
BHLHE41	MA0636.1	chr1:78534131-78534141	GTCACGTGAC	-	6.02
MITF	MA0620.2	chr1:78534127-78534145	GGATGTCACGTGACCTGA	+	7.36
MITF	MA0620.2	chr1:78534127-78534145	GGATGTCACGTGACCTGA	-	7.36
RUNX1	MA0002.2	chr1:78534289-78534300	AAACCACAGAA	-	6.32
USF1	MA0093.2	chr1:78534131-78534142	GTCACGTGACC	+	6.14
USF2	MA0526.2	chr1:78534129-78534145	ATGTCACGTGACCTGA	-	6.09

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_00646

chr1:78528734-78536080

Myotubes

Enhancer Sequence

TTCCGGTGAA TAACTGGAAT GTAGCTCAGC CTATGTAACT GTTTTCCTAA TGAGCTGTGG 60
TTGCTTTCAG TTTTGTGACT AGATGACTTT CTCGCACAGA GACTTCGCTG TAAGTAAGTG 120
ACATTTTCAA TTGTTCTGAA AGATATTTTT TAAAAAGTCA TAATAGAGGA TGTCACGTGA 180
CCTGAACATT TCACAGTCAG TCACAATAAG AACCCTGTGG TCTTGCTTGT CAGCTGTGCC 240
CAGGGGAGAA TGAGAGTGAC GTGGCTCGCA GCAACGCCTA CTCTGCGCAC AGCTGCAGTC 300
GGCACAGCAG CGCATTTGAC TCAGAAGTCA AACCACAGAA TGACAGCTCA GTGTCTGCTG 360
AGAAGGGAAA CTCTTTATTT 380