EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM075-04092

Organism

Mus musculus

Tissue/cell

HFSC

Coordinate

chr8:109050700-109051290

Target genes

Number: 11
Name	Ensembl ID

Slc7a6	ENSMUSG00000031904
Smpd3	ENSMUSG00000031906
Zfp90	ENSMUSG00000031907
Cdh3	ENSMUSG00000061048
Gm10073	ENSMUSG00000060019
Cdh1	ENSMUSG00000000303
Tmco7	ENSMUSG00000041949
Has3	ENSMUSG00000031910
Chtf8	ENSMUSG00000046691
Rpl10	ENSMUSG00000074108
Gm16209	ENSMUSG00000083734

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Gfi1b	MA0483.1	chr8:109051234-109051245	AGCTGTGATTT	-	6.14
RFX3	MA0798.1	chr8:109050811-109050827	TGTTTCTATGGAAACA	-	6.03
SOX10	MA0442.2	chr8:109050985-109050996	GTCTTTGTTTT	-	6.14

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_09589	chr8:109050736-109054884	MEF
mSE_11373	chr8:109047009-109054931	Placenta

Enhancer Sequence

ACAGAATGAC TTTAAAAGAG GAGTTTTGAA CCTAAGCTAG GGACTCCAGT TCCATCAGTG 60
TCTCCTATCT AAGGCGGAAA CACAGGACTC CTACCTTTTT TTGATTGTGC TTGTTTCTAT 120
GGAAACAATC CCAGCTGAAA GCCGTTCCTT TCCCTGGGTC CAGCAGGCAC ATCTTCCCTC 180
TTAGAGGACT CAGGTTAAAG TTCGCTTCCT TCTGTGGGGA AATCAGGCTA CAGCCGTCAA 240
GTGCCTGAGG CCTGGGGTGG GAATGGAAGT CAGAACCCTG TTGAGGTCTT TGTTTTCCAG 300
CTTAGCTCGC TGGAACTCAT CAACTCACCT CGGGAAGATA GTGACACAAG CCCGTTCATG 360
CCCCCATGAG TTAGCTAAGA CGTGTGGCCT GGCAGCCTTA ACACCACCAA AAACAGGCAT 420
CGTTCATTGA GGAAGGTGAG GCCCGAGCAG GATGAGTGGT AGAAGACCTG GTTTGAGATC 480
AGCTTCACCT TGAGACCATG GCCCAAAGCC ACTGGTTCCA GGAAGCTGCA AGGAAGCTGT 540
GATTTGCCCC AGGACTTAAC TTGTCAGCAG TTTCTCTGCG ATGCCTAACT 590