EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM075-04000

Organism

Mus musculus

Tissue/cell

HFSC

Coordinate

chr8:74094020-74094610

Target genes

Number: 16
Name	Ensembl ID

Use1	ENSMUSG00000002395
5430437P03Rik	ENSMUSG00000031820
Dda1	ENSMUSG00000074247
Ano8	ENSMUSG00000034863
Gtpbp3	ENSMUSG00000007610
Plvap	ENSMUSG00000034845
Gm7850	ENSMUSG00000092037
Bst2	ENSMUSG00000046718
Fam125a	ENSMUSG00000031813
Tmem221	ENSMUSG00000043664
Slc27a1	ENSMUSG00000031808
Pgls	ENSMUSG00000031807
Fam129c	ENSMUSG00000043243
Glt25d1	ENSMUSG00000034807
Unc13a	ENSMUSG00000034799
Jak3	ENSMUSG00000031805

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr8:74094473-74094484	GGGGGCGGGGC	-	6.02
KLF5	MA0599.1	chr8:74094474-74094484	GGGGCGGGGC	-	6.02
SP1	MA0079.4	chr8:74094472-74094487	TGGGGGCGGGGCCAG	-	6.43
SP4	MA0685.1	chr8:74094043-74094060	AGTTGGGGCGTGGCCTA	-	6.1
SP4	MA0685.1	chr8:74094470-74094487	GCTGGGGGCGGGGCCAG	-	6.33

Enhancer Sequence

ATGTGGGCGG AGAAAGAGGC CTCAGTTGGG GCGTGGCCTA ATGATGAGGG GGATGATGGA 60
GGCTGTCCTT GTAGGAACAC CCAGCCTCTG AGGCCGGATA AGCATGAGGA TAACAAGTGA 120
ATTTTGAGAC ACAGAGGAGG GATGAGGCGA CATTAGGGCA TGGCCTGGAC CATTGGCTGC 180
GAAGGGCCTA GGTGTGTGCG GGTTACTAGG CGACCCCAGG CTTGGAGGGC TGAAGCTCAA 240
GGGTGGAGCT TGACCGTGGG GGTGTCTAGC CACGTGGTCA GTGCTTGGGG AAGGGGGGAG 300
GTCTGGCTTT GATGGGCGGA GGATAAAGAT TGATATGGAA GTAGCCAATC CCAGGCCTTG 360
AGGCGGTCAA TGTTAAGTAA ACTGGTTGGA TTTGGCTTTC TTGGTGCTTA GCTCAGCGGC 420
GGCGGGGCGG GACCTGATAC TAAGGTACAC GCTGGGGGCG GGGCCAGGCT TGTAGTAAAA 480
GCGTTTGGGT TTAGGCTACA GTGTGGAAAA AGAACGCGGC CAGGGTCTGT GACGTGACCT 540
GGGCGGGATC AGGACTAGGT GGGAGGCGGT ACCTGCGGTC TCAGCTGTGT 590