EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM075-03732

Organism

Mus musculus

Tissue/cell

HFSC

Coordinate

chr7:51917210-51918500

Target genes

Number: 21
Name	Ensembl ID

Syt3	ENSMUSG00000030731
2310044H10Rik	ENSMUSG00000008140
Pold1	ENSMUSG00000038644
Nr1h2	ENSMUSG00000060601
Gm15396	ENSMUSG00000087560
Kcnc3	ENSMUSG00000062785
Myh14	ENSMUSG00000030739
Vrk3	ENSMUSG00000002205
Zfp473	ENSMUSG00000048012
Atf5	ENSMUSG00000038539
Akt1s1	ENSMUSG00000011096
Tbc1d17	ENSMUSG00000038520
Pnkp	ENSMUSG00000002963
Ptov1	ENSMUSG00000038502
Med25	ENSMUSG00000002968
Fuz	ENSMUSG00000011658
Irf3	ENSMUSG00000003184
Rras	ENSMUSG00000038387
Snord35b	ENSMUSG00000064767
Snord35a	ENSMUSG00000065818
Rpl13a	ENSMUSG00000074129

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr7:51917713-51917724	GGGGGCGGGGC	-	6.02
KLF5	MA0599.1	chr7:51917714-51917724	GGGGCGGGGC	-	6.02
RREB1	MA0073.1	chr7:51918049-51918069	CCACACCCCACACCCCACGC	+	6.15

Enhancer Sequence

AGGAGGTGGA GCCAGAAATA TCAGGCCATC TGACTACATA TGGAGTTTGA GACTAGCCTG 60
GGCTACGTGA AACCCTGCAG GCCTGTTTTC TCAAAAACCA AAGAAATAAA CAAACAAGAG 120
ATGAAGGAGT CAGATATGGC AGGACAGCCT ATCATCCCTG CACTCTGGAG GCCAAAGCAG 180
GAGGGTTCTT GTCAGCCTGA GATTCTGCTG AACTCACAAG GGCGTCAAGA TCAACAGGAA 240
ACACTCACCG TCCACAGAGG TGGATAGGTA GCCAAGAACT AGTTAGCCCT TTAGCTAAGT 300
CAGCCCAACT AACTAGCCAG CTAACTAGTC TAATGCACTG GGGACAGCCA GCTGAAGGAG 360
CTAGAAAGCT CACCTCATGG CCACAGCTGC TTATTAAAGC CAGTCAGCCA ATTGCTGGCT 420
CTCTAGTGGG TACCTGCTTT CCCCTCCCAC CTGGCTGCAG GAGGGTGTAG CCACCAGGGT 480
GCCTGGTATT ACCTCCTCAT AGAGGGGGCG GGGCAGCTGG CCACAAGCGG GAGAACCGGT 540
CAGCCTAGTA TCTGTCTCCC TAGTCTCCCA GGCTGCTCCC ACTGGGCTCT CAGAGGTCTC 600
GGGGTGGGGC GGCTGGACCA CATTCCCTGG GAGGGTATCT CATGGCCGCT GGCGCCAGAG 660
CCCACTCCCC ATGCCAGCCC CTCGGGCCAG ACACAGCTTG GGTAACACCC AGGATGGAAA 720
CTCTAGCTGG CCAACAGGGC CAGGAAAAAA GGGAAGCGGC CACAGTTCCT AGAGGGTCCC 780
TGGAAGGGTC TGGAAGGGTT GTCTAGCCCA GAGGGCTCTG GAGACAGGCC TACTCCTCCC 840
CACACCCCAC ACCCCACGCA CAGTTTGAGG ACATTCCCTT GTCTGGCTTC CTCTGGAAGA 900
GGTAGACAGC CTGCCTCATT ACAAAGGCTC AGGGATTAAG AGAGAATGAA CAGGAGCCAG 960
CCAAGGTGGC CCCACCTCCC TCTCCAAACA GCAGGCTGGG ATGCTCGAGT TACAGTCCCA 1020
CCTAGGAGCC AAAGCTGCTG GGCTTTAACT GTCTAGGGTT GGAAGCCCAG AGGCTGAGGT 1080
TCCCAGCCAT GGGCAACTTC CAGGAAGGAC TGACCCCCTT AAAGACTCAG TGACAACCAG 1140
GGCTGATAAG CATAGGCCTG CCAACATAGC TTCTCTGGAG ACTGAGGCAG GAGGATCAGA 1200
AGGCTACCAA AGGCAAACCA GTGGGAACCT GTCTCAAAAT AAAAAGAGAT CTAAGGATGT 1260
GGTTTAGTGG TTAGAGCCCC TGCCTGAGGC 1290