EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM075-02816

Organism

Mus musculus

Tissue/cell

HFSC

Coordinate

chr3:108246430-108247910

Target genes

Number: 15
Name	Ensembl ID

Gstm1	ENSMUSG00000058135
Amigo1	ENSMUSG00000050947
Cyb561d1	ENSMUSG00000048796
Gm12501	ENSMUSG00000083462
Psma5	ENSMUSG00000068749
Psrc1	ENSMUSG00000068744
Celsr2	ENSMUSG00000068740
Sars	ENSMUSG00000068739
Scarna2	ENSMUSG00000088185
Tmem167b	ENSMUSG00000068732
Wdr47	ENSMUSG00000040389
Gm12517	ENSMUSG00000081499
Clcc1	ENSMUSG00000027884
Gpsm2	ENSMUSG00000027883
Stxbp3a	ENSMUSG00000027882

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ATF4	MA0833.1	chr3:108247116-108247129	TATTGCATCAGAC	-	6.2
Nr5a2	MA0505.1	chr3:108246469-108246484	GCTGGCCTTGAAATG	-	6.17
Nr5a2	MA0505.1	chr3:108246947-108246962	GAGTTCAAGGCCAGC	+	8.25

Enhancer Sequence

TGCTCGGAAC CAAGGTGTTT TGTTTTTGAG GCAGGGTCTG CTGGCCTTGA AATGCATATC 60
CTCCTGCCTC CGACTACCTT GTGTTAGGAT AATATGTGAA TGCCACCAAG TCCATCTCAG 120
AGTATCTCCT TCCAAGAGAG GCTCTCACTA TGTAGCACTG ACTGGCCTGA AACTCACTAT 180
GTAGACCAGG CTAGTCTCAA TCTCGGACAT CTATCTCTTT CTGACCCCTA GAGTCCTGGG 240
ATTAAAGGCA GGTACCCCCC AAATATTCTT TATCTTAAAC AAAAAAGGGG AGTTCAGTTT 300
AGACCAATTC AAAACTTTTG GTCCAAGTGT AAACTCTGAC AAATTACCCT ATTAGAGTAC 360
CTGAGACATA CAGAACAGGT ACACAACTGT CAGCTAAGCA AATATGTTTT GATACCAAAG 420
AAGCTTTTTA ACAGTAAAAT CATGTCCACA AAACACCCCT ATGGGTATGG TGGCACACAC 480
CCTTGATCAC TCTCGAAGCA GAGGCAAGTG GATCTCTGAG TTCAAGGCCA GCCTGGTCTA 540
CAGAGCAAGT TCCAGGATAG CCAGGGCTAC AGAGAGAAAG AAATCCTGTT TATTTTGGAG 600
GGTGGGAGTA GGAGGGAGAC ACTCTTGGAT CGTGGGATTG CCTTAGCAGT GCTCTTATAA 660
ACCAGGTTCT CAGCTGGTTG CAGACCTATT GCATCAGACT ACCCGAGTCA CATGCCACTG 720
ACAACATCCG GTCTGCCAGG TGATCACTTG GGAGGCAGAG GATTCTAGAG CTTCTTTTAA 780
TTTCCTGAAT GACGATGGGT CACTTCTACG CTGCCAACGT CTTTTCCAGA AAACTACCAC 840
AAATCACAAC CATCCTCAGT AATTACAAGC TTTTTCTTGC CTTACAGCAC CCCTCCGTCC 900
TATCTGATCT AGCACGGAAA AGCCTGATTC TTAAAGGTAT GCCTTCAGGG TTGGAGAAGT 960
GGCCACCCCA AATTTCAGGG TCACTGCATT TAGTCAAGAG TAGCCTCCAA AGTCCCCAGA 1020
TGGTTCGACT GGGGTGGAGT AATCCTAGGG TGCTGCAGAA GTCACTCAGT CTGAGAGAGC 1080
AGCCTTTGAT CCCTGCAAAA CCCGGAGGAC TACGCTGGGT TTGCTAAAGA CGAATAAAAC 1140
ACTGAGAATG ACCAAAATGT ATAGAAAATT AATTCCCAGC CCGCCCCCCA AGTAAAACTC 1200
CAGCTCTGGC TTGCTGTAGC TACGCAAGGG CCTGACAGCT CTCCCTGCGC GTGCGTGCGT 1260
GCAGCTCCTT CCTAAAGCAC TGGCGGCAGT CAGCATAGAG CACGCGCGGG GAGGGACCCA 1320
GGCCGCGGGA GCTGCAGGGA GAGGGGGACA AGCCCGGTTC CCAGCTTGTT CTACGGACAA 1380
GCCGGTAGAG CCGGCCAGTC GCGGGAGCAT CTGACAAAAG CTGTAAGCTG TGACCTCTGA 1440
AGCCATGAGG GATTCAAGGG ATACTGCGAG CTCCTGGTAC 1480