EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM075-02161

Organism

Mus musculus

Tissue/cell

HFSC

Coordinate

chr19:4332940-4334320

Target genes

Number: 18
Name	Ensembl ID

Unc93b1	ENSMUSG00000036908
Ndufv1	ENSMUSG00000037916
Gstp1	ENSMUSG00000060803
BC021614	ENSMUSG00000058216
Cdk2ap2	ENSMUSG00000024856
Aip	ENSMUSG00000024847
Tmem134	ENSMUSG00000024845
Coro1b	ENSMUSG00000024835
Rps6kb2	ENSMUSG00000024830
Ppp1ca	ENSMUSG00000040385
Rad9	ENSMUSG00000024824
AC109138.1	ENSMUSG00000093346
Pold4	ENSMUSG00000024854
Ssh3	ENSMUSG00000034616
Adrbk1	ENSMUSG00000024858
Kdm2a	ENSMUSG00000054611
Rhod	ENSMUSG00000041845
Pcx	ENSMUSG00000024892

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr19:4333305-4333325	GGGGTGGGGGTGGGTGGAGT	-	6.7
Sox3	MA0514.1	chr19:4333699-4333709	CCTTTGTTTT	+	6.02

Enhancer Sequence

AGCAAAGCAG ACTGCACAGA AAGACCTATG GTTAAGAGAG TAGAAAAGGA ACTTAAGTTC 60
ACTGGAACAG TTTAATTCCA CCTGCAAGAC TTTTGTAGGG GGCACAGAGA AGGGCAGAGA 120
GACAAACTGT GGGCTGCGCT GGGTGGGGGC AGTTAACACA CACACCACTC AATTACTGGG 180
GTGTGTGTGG GTGTGGAGGG AAATGCAGAT TTCCTTCCTA GCCTAAATTC GGTGGGGCCA 240
AGTCCGCAAT GGTTTCATTA AAAAAAAGAA AAAAAAAAAA AAAGACAAGA CTGTAGCTGA 300
GGTCCTAGGA GAAATCATAA AAAAGCCACC ACCACTCACC AGTAGGGATT TAGGATCAGG 360
GAGCGGGGGT GGGGGTGGGT GGAGTGCGGA AAGGCTCTGC CTATCTAGGT TCCAGGCTTT 420
TGGGAGAACA TTCAAACACA GGCCCACACC CCAGAGAACA GAGAAGGGAA GGAGAACGGA 480
GGGCCCTCTG ATCAAGCTGT AAGTACTCCC CAAAGCCAAG CACCCCAGTT CCAAAGCACA 540
TCCCACCAGC TAGAGAACAA GTGTTAACAA CGGCTCAAAC ACAACTAACA CACGCATTGT 600
CCTGGACTTG CCCAGCAGGC AGTTCTGCCT TCTGCTAGAG ACAAAGTCTC TACAGTTATA 660
CACACCCCAA ACCAGAAAAG GCTTGCCAAC CGACCGCCTG ACCTTGCATT TCTTGTTGCT 720
CTGGAGCTGC GGAGGCTCTT GGGTGAAGTT TCCCCAGCGC CTTTGTTTTG TTTTCTGTGT 780
TGAAGTTGTG CGGAAGGAGT TAGCTTTTCT GCTTCTAGGA AAATCCTGAT TTTCGTGAAA 840
ATCCCGAATC TCCCAGAGCA TGTAAGGTAG GGCAGTCCTG CTATAGCCCG TCAGGCTACT 900
CAGAACAGCG TGGAGCACTC TGAGCTCCTT CTAAAGCCCT TCAGCTCAGC CGCGGCTTCC 960
TGTGCCTGCG AACAATGCTG CTGCGTCACC CACATGCAGC TCCCAGAAAT GCTTTGCAAC 1020
GGAAGATGGC AGGAGGGGGA GCGCAGCTCG AGCGAGCCAG CCAGGCAGAG GGCCTGGCCG 1080
TTCTGCTGCA GCACCCAGAG GGGAGGTGTT TGGCAGCCGC TCACCTCCTC GTGATTGGAG 1140
GAAGCATAGC TGGGGGAGGG AGCTTGGCCA GCTAAAGCCC CAGATCCTTC GCTCCAACAC 1200
TGCAACAGGA GAACCCAGGG CGAGCCCCGG GAGGGCTCTT GGCAGCAGAC TTCAGGAGGC 1260
GGCTGTGGAA GGGAAGGCTT TAACCCGATC CACAGGCTAT GTATACCTAG ATACCTTGAC 1320
AGTAGCCTCA TCCCATTCCA CTCGTTGTCA CTTATTGCTA TAACCAGAGC TCTCTCACTG 1380