EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM075-01956

Organism

Mus musculus

Tissue/cell

HFSC

Coordinate

chr17:66233450-66234010

Target genes

Number: 9
Name	Ensembl ID

Vapa	ENSMUSG00000024091
Rab31	ENSMUSG00000056515
Ppp4r1	ENSMUSG00000061950
Ralbp1	ENSMUSG00000024096
Twsg1	ENSMUSG00000024098
Ankrd12	ENSMUSG00000034647
Ndufv2	ENSMUSG00000024099
ORF19	ENSMUSG00000024101
Ddx11	ENSMUSG00000035842

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF14	MA0740.1	chr17:66233860-66233874	GGCCACGCCCCCCA	+	6.83
KLF16	MA0741.1	chr17:66233861-66233872	GCCACGCCCCC	+	6.62
SP1	MA0079.4	chr17:66233858-66233873	GCGGCCACGCCCCCC	+	6.05
SP3	MA0746.2	chr17:66233860-66233873	GGCCACGCCCCCC	+	7.22
SP8	MA0747.1	chr17:66233861-66233873	GCCACGCCCCCC	+	6.44

Enhancer Sequence

AGATCAGACA GAACACTTCT GAACCCTGGA ACAAGTACCA CTGCAAACAG GGTCGTCCCC 60
TTGCCCAACG CCTGCCACGG GCGACAACAG GAGCTGTTCC CCCGACTCTA CCCGGCAAAC 120
ACGGAGACAG GTGGGCGAGC CAGATGCGCG AGGCAGATGC GACCCATAAA CCGGAAGGCT 180
TGCGTCAGGC CAGTCCCCGG CCGCAGCTCC GGCCAGGTGT GGCCCGCAGG GATGCCCCGA 240
GGCCTGGAAG GGTCCGAGGA AGCAGCTGGA CTCCCAACTA GCCTCTGGGT CCCAGAGCAA 300
CACAGGACAC ACCCGGGTGC TCCCAAGGAG GCCTGTCGGG CAGGCGGCGT GACCCACCCC 360
AAAGGAGCAA GCTCCGGGGT GAAGCTTTCA CGGACAACGT AAGGCGGGGC GGCCACGCCC 420
CCCACCCCCA ACTCCCATTC CGAGCCCGGG ATCCCAAGCC CGGCACGCTG CGTGACAGGC 480
GCGGGCGCGA GGCCGGGCGC CCGACGGCTC CCACGGACAC CGCCGCAGCG TTGCGACCCC 540
CGCGAGCGTC CGCTCCCCGC 560