EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM070-06146

Organism

Mus musculus

Tissue/cell

Heart_E11.5

Coordinate

chr2:110032050-110033500

Target genes

Number: 4
Name	Ensembl ID

Lgr4	ENSMUSG00000050199
Ccdc34	ENSMUSG00000027160
Gm13937	ENSMUSG00000082512
Fibin	ENSMUSG00000074971

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

PKNOX1	MA0782.1	chr2:110032090-110032102	AGACACCTGTCA	-	6.44
PKNOX2	MA0783.1	chr2:110032090-110032102	AGACACCTGTCA	-	6.07

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

mSE_03301	chr2:110013502-110054714	TACs
mSE_07789	chr2:110030919-110033888	Intestine
mSE_08031	chr2:110029390-110033940	Kidney

Enhancer Sequence

TACATCCTTG TTCAAAGAGG TAAGAAGGGG AAAGGGCAAA AGACACCTGT CAGCTAAGAC 60
AGATTCTCTT CATCAGTAAA ACAATAGGTT CTCAGAAGCC CTGCTCTGAC TCATCGCTCT 120
CATTGACTTT CCTCCACCTT GCCCATATCA GCAGGCAATC TAGATTGTGT CGGTCAAAGG 180
GACACACACA CACACACACA CACACACACA CACACACGCA TGCATGCACC AATGCCCATT 240
GTATCGAAAC AAAACATGCC AGTCTCAGTC CTTCAAGCCT TCCAGGCATG GGAACATGGG 300
TGAATGCAAT GTGAATAGGT TACAAAGCTT GAATGAGAAA ACCGTGCGGT GCCTGGCCCA 360
CAGCGGAGTG TCCAGTCACC TCTTTTCTCG CTCTCCCTGT TTTTCTTCTA CTTTGCTCCT 420
ACATCTCGCT TTAAATGCTC TAAACACAGC AGCACTTCCA GAGTTAAGCA CCCAGACAAG 480
CAGGCAAGTC TGTATTCAGA GCTCAGAGGA AAGTTTATGA GGGAGGAATG TAATAGCCCC 540
AGCTGGAGCG CCGCCAGAGG ACTAGCAACT GCAACACCCT TATTTGCTCT GGGGAGGAGC 600
AGCTTGGAAA CTTTTTATGA GATTCCAGAA GCAGCAAGGT CATCGGTTTT ACTGCCGTCC 660
TGCTCCATTT GTAAATACAG CCTTTGAATG ATAATGTTTG GGCTCCTTGA CAAGAGCCGA 720
GGCTGGCAGT TAGCTCCTCT GCAGCAGGGG ACAATAGAGT GAGAGATGTT CTGCTCTGTA 780
TGACGGTGAG GTATGCAGAG TAATTTTAGA CCCTAACAAA CAATGGTGAT AAACCATTCC 840
TCCTTTCAGA GAGCTTAATT TCCAAACGGC CTCACCATAA ATTCCCTGGT ATGTATCTGA 900
GGCAGGTAAT CTGATTAGTC AGGTCCCAAG AGAAGCAACA CATGTTTACT GTCACGCTCA 960
TTTTCCAGCC AGCTGCAAGG GTCTGGAGGA GGGCTCTTGG TTAAGCCTGT TTGCTGTGAT 1020
CCTCTCAAGG CCAAGGAGGG CTGTGTCCTT GCCAGGACCC ACATATTCTT TCAAGCAAGA 1080
AACCTTTCTC CAGTGACACC TGGTCCTCTC TCTAGCTGCT CACTAGACCA TGCCTTTTTT 1140
TTTTTTTTTT TTTTTTTAAA TCACAAATGA GAGTTTACTA GACTGGACGC AGGAAACATT 1200
TGTCACCATT TGGCCAGGTG CTAGGTCTTA TGTGGCTTGC AGTTGACCAT GGGAACAGGG 1260
TCATTCCACC CTTAGGATCC TGTTCTGGCT AGATGGCAGC AGAGGCAAAG GCAGCTTGTG 1320
GCACACAGAC TCTTGAATGT GCACCTGGTT TAGGTGCTGG CATTTGTTGG ATCTGAAACT 1380
GCACAATGCC TTGTAGTCAC ATGAAGCAGG ATAGATCTTA AGGTTTTCCT CCCTCCCTGT 1440
CCCTGTCACA 1450