EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM069-28605

Organism

Mus musculus

Tissue/cell

Heart

Coordinate

chr7:20345760-20346780

Target genes

Number: 27
Name	Ensembl ID

Dmpk	ENSMUSG00000030409
Snrpd2	ENSMUSG00000040824
Rtn2	ENSMUSG00000030401
Cd3eap	ENSMUSG00000047649
Ckm	ENSMUSG00000030399
Mark4	ENSMUSG00000030397
Bloc1s3	ENSMUSG00000057667
Trappc6a	ENSMUSG00000002043
Ppp1r37	ENSMUSG00000051403
Gemin7	ENSMUSG00000044709
Zfp296	ENSMUSG00000011267
Clasrp	ENSMUSG00000061028
Relb	ENSMUSG00000002983
Clptm1	ENSMUSG00000002981
Apoc4	ENSMUSG00000074336
Apoc1	ENSMUSG00000040564
Apoe	ENSMUSG00000002985
Gm20512	ENSMUSG00000092381
Tomm40	ENSMUSG00000002984
Pvrl2	ENSMUSG00000062300
Bcam	ENSMUSG00000002980
Cblc	ENSMUSG00000040525
Gm16175	ENSMUSG00000087206
Bcl3	ENSMUSG00000053175
Gm16251	ENSMUSG00000090075
Pvr	ENSMUSG00000040511
2210010C17Rik	ENSMUSG00000040498

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr7:20346038-20346049	GCCACGCCCCC	+	6.62
Klf1	MA0493.1	chr7:20345984-20345995	AGCCACACCCT	+	6.02
SP1	MA0079.4	chr7:20346035-20346050	TGAGCCACGCCCCCA	+	6.13
SP3	MA0746.2	chr7:20346037-20346050	AGCCACGCCCCCA	+	6.34
SP8	MA0747.1	chr7:20346038-20346050	GCCACGCCCCCA	+	6.11

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

mSE_05137	chr7:20345262-20346141	E14.5_Heart
mSE_06740	chr7:20344782-20346416	Heart
mSE_10360	chr7:20345154-20346107	Embryonic_stem_cells

Enhancer Sequence

TCTGCAGTGG GGAAAACGTG GTCACTCCAA GGCTTACCAG GGACAGATGA TGCCATGTTG 60
TTCTATTTGA GTACAATGAT ATCTGTACTT TCCACTCAGG CCCATCAGCA GATACCAGAA 120
GAGCCGCTCT AAAGAATGCA TTACCTGACC TTCAGAGGCT TTACAGTGCT CAGGGTAGGA 180
CCCAGGGCCT CCCACCTGCC AGGCAAGTAA ATGCACTAGC CCCGAGCCAC ACCCTCAGCC 240
CTTCACTGAG GGATCCTGGG CAGGGGCTCT ACCACTGAGC CACGCCCCCA GCCCCTCACT 300
GGGGGATTCT AGGCAGGGGC TCTACCACTG AGCCACACCC CCAGCCCCTC ACTGGGGGAT 360
TCTAGGCAGG GGCTCTACCA CTGAGCCACA CCCCCAGCCC CTCACTGGGG GATTCTAGGC 420
AGTTCTGCTT CAGCGCTGTG CCTCTATCTC TCCACCTCAA GTTTTGTTTG AGCTCAATTT 480
TTTTCTCTTT CTGTGCCAAC ACATCCCATC TCCATAAAAG CTTGACGGGC TTGGACCAGC 540
AAGATGGCGT AGACATTTAT CAAGATGAAT AGACACTTAT CACTAAGCCA GACAACCTGA 600
CTTCACGCCT CTAGACCCAC AGGGTGGGAG GAGATAACAC TTCTGCCAAT TACATGCATA 660
CATGTATTGT GCACAATGGA TTAAAATGTA ATGATAATTT TTAACTCATC AGACAACCTT 720
GGTGGGCTCA TGGCTAGGTA TAAACACAAG GGATAGAGCA TTTGTCTAGC ATGGAAAAGA 780
CCCTGTGTTC AATTGTTAGC GTCTCACAAG ACAACTAAAT TCTGGCTGGT TGGGCTGGAG 840
AGATGGCTCG GCGATTAAGA GCACTGACTG CTTTTCCAGA GGTCCTGAGT TTAAATCCCA 900
GCAACCACAT AATGGCTCAC AACCATCTGT AACAAGATCT GACTCCTTCC TCAGAAGTGT 960
CTGAAGACAG CTACAATGTA CTTATATATA ATAATAAATA AATACTAAAA AAAAAAAATT 1020