EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM069-01795

Organism

Mus musculus

Tissue/cell

Heart

Coordinate

chr1:173382080-173383620

Target genes

Number: 25
Name	Ensembl ID

Fcgr2b	ENSMUSG00000026656
1700009P17Rik	ENSMUSG00000026649
Sdhc	ENSMUSG00000058076
Mpz	ENSMUSG00000056569
Pcp4l1	ENSMUSG00000038370
Tomm40l	ENSMUSG00000005674
Apoa2	ENSMUSG00000005681
Fcer1g	ENSMUSG00000058715
Ndufs2	ENSMUSG00000013593
B4galt3	ENSMUSG00000052423
Ppox	ENSMUSG00000062729
Usp21	ENSMUSG00000053483
Ufc1	ENSMUSG00000062963
Dedd	ENSMUSG00000013973
Nit1	ENSMUSG00000013997
Pfdn2	ENSMUSG00000006412
Klhdc9	ENSMUSG00000045259
Arhgap30	ENSMUSG00000048865
Tstd1	ENSMUSG00000091166
F11r	ENSMUSG00000038235
Alyref2	ENSMUSG00000060244
Gm9765	ENSMUSG00000038218
Cd244	ENSMUSG00000004709
Ly9	ENSMUSG00000004707
Cd48	ENSMUSG00000015355

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SOX10	MA0442.2	chr1:173382666-173382677	TGCTTTGTTTT	-	6.02
STAT1	MA0137.3	chr1:173383151-173383162	TTTCCCGGAAA	-	6.32
Stat4	MA0518.1	chr1:173383148-173383162	TCATTTCCCGGAAA	-	7.28

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_01623

chr1:173382646-173401389

Macrophage

Enhancer Sequence

GACTGGGGTT CGGATCCCAG GATATCCCCA TGATAGTTTA TCACCATCCA TGTAACTCCA 60
GTTACAGGGG ATCCAGTGCC CTCTTCTGAC ATCTATCTAG GACTTGAGAG ATGGTTCATC 120
AGTTAAGAGC TGAATTTGGT TTCTAGCACC AGTGTTTCGA GGCTCACCAC CACCTGTAAC 180
TCTAGCCCCA AGGGATCTGT TGCTCTCCTG GCATCTGTGG AAACCCACAC ACATGTGCAC 240
ACATAAATAA AAATAAAACC TTACAAACAA AAACAAAACT AGGTTTTAGG AGCTGGGAAG 300
GCAGCTTGGT TAGTTCAGTG CTTGTCTCAC ATGTATGATG GACGCCTTGG ATTCAGTCCG 360
CAGTGATGCA TGAAATTGTG CATGGTGCAG TATTCCTGTA ACCCAGAATT CAGGAGGTGA 420
AGGCAGGAGG TACAGAAATT GGAGGCTAGC CTGCTAGCCT GGGCTATATG AGACCCCATC 480
CCAAACAAAA CAAAAATAAT AATTTTAGTT TTCTTCTCCC GGAAACTAGA ACTTTAAGAA 540
TGTGTTAGTA TTAAAATATT ACAGAGATTG GATTTGGAAA CAAGGTTGCT TTGTTTTGTT 600
TTCCCCTGCA TTTGCTATCT CCCCATCTGT CATTCCCATT TAAAAATTGG ATTTGTTTTT 660
TTAAGATAAA CCTCAACAAT AGATAGTAAA GTGAAAGGTC TGCTAGGACC TAATTTGTTT 720
GTGTTCTGTG CCACTCAGCA AATACGTAGT ATCAGGCACT ATGCTAGCGG TTGAGTAATA 780
TTTAAATTAA CAAACCAGAC GTGGTCTCTG CTGTCTGGGC AATTGCTGGA AAGTCGTGGG 840
AGTGTTTATA TGTAGCACAG AGTTTAGGAC TTTTATTTTC AAGACAGGAC AGCCCTGACT 900
GTCCTGAAAC TCACTCTTTA GATCAGGCTG GCTCTCAGAC TCGGAAATCC ACCTGCCTCT 960
GCCTCCCAAG TGTTAGAACT AAAGGCTTGA GAAGTATTTC AGCGGTGTTT CTGCAGGGGG 1020
TAATGAAGGC CTAGGGAAGA GGCTCCGAGA GGACTGGGGT GTGGCCGGTC ATTTCCCGGA 1080
AAGAGAAAAA GGGACTGTTG CCAAACAGGT AATGAGGGGA AAGGGTGTTT CCCACAGCAG 1140
AGAAAGCTTG AGCAAAGGCA GGGATTGGGA AACAGCTGGG AAGTGGTTTT GTGTTGCAAC 1200
AGCAGAGTGG GTGAGAACTT GGGAAGCTTC ACACAACTCA GATGGGGCGG GGAATTCTCT 1260
TGCTAGATAT TTGCATTTTG ACACCTATGC TGCCTAGTGT CCTCCAACAC TGGCCACAGA 1320
GTTGGATCTG CCTTGGGGGG AAGGCTGTGG AGTGTTGAGG TTGAGTAGCA ACCACCTTGC 1380
AGTTGTACTG AGTTGGTTTG AAACTTTGCT ACTGTTCACT GTTAACTTGG TCTGTGGGTA 1440
GAGGTCATTC TTCCATGTTT GCTTGGCTAG GTGTTTTGTT TTGAGACAGG CTCTTTCTAT 1500
GTCTCTGTAG CCCTGGCTGG CTTGGTATTC TGGGGTGTCC 1540