EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM068-00649

Organism

Mus musculus

Tissue/cell

GMP

Coordinate

chr1:173561480-173562530

Target genes

Number: 14
Name	Ensembl ID

Ppox	ENSMUSG00000062729
Usp21	ENSMUSG00000053483
Ufc1	ENSMUSG00000062963
Nit1	ENSMUSG00000013997
Arhgap30	ENSMUSG00000048865
Usf1	ENSMUSG00000026641
Tstd1	ENSMUSG00000091166
Alyref2	ENSMUSG00000060244
B930036N10Rik	ENSMUSG00000091993
Cd244	ENSMUSG00000004709
Ly9	ENSMUSG00000004707
Cd48	ENSMUSG00000015355
Gm15431	ENSMUSG00000059058
Cd84	ENSMUSG00000038147

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr1:173562163-173562175	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr1:173562167-173562179	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr1:173562171-173562183	AAACAAACAAAC	-	6.32
IRF2	MA0051.1	chr1:173561806-173561824	TTTTAGCTTTCACTTCCC	-	6.26
MEF2C	MA0497.1	chr1:173561800-173561815	TCCTATTTTTAGCTT	-	6.27

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_01187	chr1:173557775-173591982	Th_Cells
mSE_01598	chr1:173546863-173603397	Macrophage

Enhancer Sequence

GATAAAACTC ACAACCACCT GGACCAATGT GAAGCCCTGG CTTCTTCCGG CCATACTGTA 60
AATAGTTCTC TTCAGATGCT GCTCTGCGCC TTACCTCTCA CCTTTGAGAG AATTTCAGGG 120
AACCCTTCCT TAATACGTAC TGATTTTATT TAAATAATAT TTTATTTATT CATAAAAGTA 180
AAGTAATAAA CACAGTAATT AGCACACAGT GCTTAGTAGC ATTCACAACT GTGCCTTGGA 240
CAGATGCCTA GGCAGCTCTG GGCAAAGCCT AGCTCAGCTC TTTGTGGTTA TGACAGAGTT 300
GCCACGTGTT GGGGAATACA TCCTATTTTT AGCTTTCACT TCCCCTCCCA TCAGCTCAAG 360
ACAGCATCTT GGCTTCTTCT CTTTTAAACA TAGATTTGTC TCCTTGATTT CATATCCCTC 420
AACCCTGGAA CCTTAGTTCC CTTTCAGCAT TCTCATGAAG ACATGTAGTT CTTGTTCTGG 480
GAGCACATCA AATACACACA CACACACACA CACACACACA CACACACACA CACACACACA 540
CACACACACC CTTACTCTAC CTGTTCCCAT GTCTCTTCCA TGACACTAGA AAAAGAAAAT 600
AAGATTTTTT GGGGGAGGAT ATATGTCTGT TTTACCTAGA AGACTAACCT AGTAGAGGTT 660
CTCAATAAAG ACTCATTGGG AACAAACAAA CAAACAAACA AACACAACTG TAAAGGTTTT 720
CAAGCCATCA AACCCCAGAC TCTATCTGTG ATGCTAGGTC TTAGACTAGA TCAAAAATTT 780
GTATGCAGGC TATTTCTCTA TTTTTAAAGA TGGACTCCTC TGTAGGCTCA GGGCGTACAC 840
GGTTCCCTTG GAGCATGTAG GTATAGTTGA AGTCCAGATG AGGGGTCCTT GTCCTCCATC 900
ATCTGCTTTA AAGGACCTCA AATGGTACCA GACAAACATA GGTGTATGTT TGGATTTTCT 960
GTCCTTGTGC ATTTTGGCCA TTGGTACCTA CATACCCTTC TGGGACTCCG TAGTTAGTAT 1020
TTCTGTGGCG CCCTATAAAG TGGTTCATGA 1050