EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM068-00202

Organism

Mus musculus

Tissue/cell

GMP

Coordinate

chr1:72290250-72291230

Target genes

Number: 4
Name	Ensembl ID

AC120136.3	ENSMUSG00000093333
Pecr	ENSMUSG00000026189
Xrcc5	ENSMUSG00000026187
Gm15843	ENSMUSG00000085812

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr1:72290546-72290557	GGGGGCGGGGC	-	6.02
KLF5	MA0599.1	chr1:72290547-72290557	GGGGCGGGGC	-	6.02
SP2	MA0516.2	chr1:72290544-72290561	GAGGGGGCGGGGCATGC	-	6.5
SP3	MA0746.2	chr1:72290487-72290500	GAGGGGCGTGGCG	-	6.18
SP4	MA0685.1	chr1:72290543-72290560	CGAGGGGGCGGGGCATG	-	6.18
ZNF263	MA0528.1	chr1:72290695-72290716	GGGGGAGGCAGGAAGTGAGGG	+	6.13

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_03263	chr1:72282943-72301822	TACs
mSE_10125	chr1:72288734-72291052	Embryonic_stem_cells

Enhancer Sequence

TGTGGAGCCA GCCTCTCAAC AAGGGAAGAT TGTCTTAAGA CAACGCGAAC TAGGAGCAGT 60
AGGTCCACCC TTCAGCCACC GTCCTGCCTC AGAGTTTATC CAGTGCATCT GGCCGTGGAC 120
ATGCCCCCTT CAGGTCTTTC TATTTCCGGT GGATTCCAAA CCGCAATAGT CTGTGAGTCG 180
GCCTGTGAAT CGCGGAGGCC GCGGGGAAGA GCTGATTTGC ACGTCCTGCC TCCACGCGAG 240
GGGCGTGGCG ACGTGCACAG GCCTAATTTG GGCTTGTGTT GTCACGCCCT TCGCGAGGGG 300
GCGGGGCATG CAAATCATAC TCGGCGTGCG CGCTCGGGAA CGCCGGGAGA GCCCGGGTCG 360
TGGACGTTGA ATCTGAAGCC GTGGGTGCTG GAGTGGGAGT GAGGTGTGGA GGGCGCAGAC 420
GCGGATCGGA GGAGGAAGGA ACCGCGGGGG AGGCAGGAAG TGAGGGTTGC GAGCGGTCAC 480
CACAAAGGTA ATGTGTCTCA CGGACGCAGA GCATGGCTGC GTGGTCTGTA TTTGGTATCG 540
CTTCTCGGCC TTTTGGCTAA GATCAAGTGT AGTATCTGTT CTTATCAGTT TAATATCTGA 600
TACGTCCTCT ATCCGAGGAC AATATATTAA ATGGATTTTT GGAACTAGGA GTTGGAATAG 660
GAGCTTGCTC CGTCCACTCC ACGCATCGAC CTGGTATTGC AGTACCTCCA GGAACGGTGC 720
AACCCCTCTG GGGAACAATG TTGGTTAAAT GTAAGACATT TAGGACTATT ATAGCTCGTA 780
AATACAGGCT GCAGTTACTT TTTCTGTCTT CTTTTCTACT TTGTAGTTAC CCGGGTCTCG 840
TTAACCCCTC TTTGATAGAC CAGGCTGGCC TCTAACTCGG AAGTCCGCCT GCTTGCCGCC 900
AGTTGATCTT TTTCTATTGC TTTACTTTTC TTATTATTAT TCAGGTTTCA TATTTCCACT 960
ACCAGGCTTT TCAGGCAGAG 980