EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM065-19102

Organism

Mus musculus

Tissue/cell

G1E

Coordinate

chr7:4828790-4830160

Target genes

Number: 20
Name	Ensembl ID

Ppp1r12c	ENSMUSG00000019254
Tmem86b	ENSMUSG00000045282
Ppp6r1	ENSMUSG00000052296
Hspbp1	ENSMUSG00000063802
Cox6b2	ENSMUSG00000051811
Tmem190	ENSMUSG00000013091
2210411K11Rik	ENSMUSG00000030431
Rpl28	ENSMUSG00000030432
Ube2s	ENSMUSG00000060860
Shisa7	ENSMUSG00000053550
Isoc2b	ENSMUSG00000052605
Isoc2a	ENSMUSG00000086784
Zfp628	ENSMUSG00000074406
Nat14	ENSMUSG00000035285
Fiz1	ENSMUSG00000061374
Zfp524	ENSMUSG00000051184
Zfp580	ENSMUSG00000055633
Ccdc106	ENSMUSG00000035228
U2af2	ENSMUSG00000030435
Epn1	ENSMUSG00000035203

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF	MA0139.1	chr7:4829972-4829991	GGGCTCCCTCTGGTGGCTT	-	6.09
EWSR1-FLI1	MA0149.1	chr7:4829356-4829374	CCCTCCTCCCTCCCTCCC	-	6.27
IRF1	MA0050.2	chr7:4829306-4829327	TTTTTCTTTCTTTTTTATTCT	+	6.08
ZNF263	MA0528.1	chr7:4829351-4829372	GTTTCCCCTCCTCCCTCCCTC	-	6.16
ZNF263	MA0528.1	chr7:4829355-4829376	CCCCTCCTCCCTCCCTCCCCA	-	6.4

Enhancer Sequence

GCCGGGTAAG TCCAACTGCC CGTCCTTACA GACGGAGGAA ACGGAAGGTT TGCGGGGTGT 60
CCAGCTGAGG AGGGGCTCCA GTTGGTCTCA GGATGGATCA TCAGGGAGGA ACTTCAAGCT 120
TCTCCAGAGC TAAGTTTTGT ATCAGCCCCA GGAGTGGGCG ATTCTCACGC CCATTTCTTC 180
CAAGAAGAAA AGCGTCCCAG AGACACAGAG CTTAGAAATC TGGGTTCCTG TAGTGGTGTG 240
CAGTAACCAC TTGCCCAATT AAGCAACCTC ATCCCCAGTC TGTCCGCAGG AGGTCACTTA 300
CCCCAGCCTA AGACAGGTTT CCTTTACTGA GCTGAGGCCT CCTTCCAGGA CCCCCACGAT 360
GTCCCGAAAT CTCTCTGCAG TCTAGACACC CTCTTCACTT TTCACACGCG CGTCCCACCT 420
CCACTCTTTC ATTGTCTCCC TTAGATTGGT TATTTTCTGT CCCAGCTCTC ACCCAGGTTC 480
CGTTTCGTCT GCAGATCATA CCTAGCTGGC CTGAACTTTT TCTTTCTTTT TTATTCTCTC 540
AGATACTACA TCTCGACTGC AGTTTCCCCT CCTCCCTCCC TCCCCAACAG CCCTCCTTCC 600
CTCCACTGCT CTTTCTTTTC CGAAAAGGGC ATGCCTGCCC TCAGACGCCA ACCAAACATA 660
GCACATCAAA TTGCAGTAAG ACTGTGCACC TCCCCTAGTA TTAAGTCTGG AGAAGGCCGC 720
TCAGGATGAG GAAAGGGTCC CAAAAGCAGG AAAGAGTCAG AGACAGCCCC TCTCCCACTG 780
TTAGGAGTTC CACTAGAAGA CCAAGCTGCA CAACCCAAAC ACATATGTAG AGGGCCTATA 840
TCAATCCCGT GCAGGCTCCC TGGTTGCTGG TTCAGTCCCT GTGAGCCCCT ATGAGCCCAG 900
GTTAGTTGAT TCTGTGGGTT GTCTTGTTGT CTTTGACCTC TCTGACTCCT GCAATCTCCC 960
CCTCTTTTCT GCAGGACTCC CCAAGTTCTT CCTAATGTTT TGATTGTGGT TCTCTTCATC 1020
TCTTTCCATA AGTTGCTGGA TAAAGTGTCT CTGATGACAG TTGGGCCAAG CACCAATCTA 1080
TACCATTAGG CATCTCAATT TTAAAAAAAA TATTTATTGC TGCCAGGAGT GTTTGGTTCT 1140
ATCCTAGGTC TCTGGGCTAT CTAGCCTCCC AGGTAGTGGG TTGGGCTCCC TCTGGTGGCT 1200
TGGGTCTCCA GCTGGGCCAG TCATTGGCTG GCTACTCCCA CCATTTCTGG GCCACCTTTA 1260
CCCCAACACA TCTTGTGAGC AGGACAAGTT GTAGGTCAGA GGTTTTGTGG CTGGGTTGGT 1320
ATCCTAATCC CTCCACTGGA AGTCTTGCCT GATTACAGGA GATGGCTGGT 1370