EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM065-14461

Organism

Mus musculus

Tissue/cell

G1E

Coordinate

chr3:96217080-96218350

Target genes

Number: 18
Name	Ensembl ID

Sf3b4	ENSMUSG00000068856
Hist2h2ab	ENSMUSG00000063689
Hist2h2ac	ENSMUSG00000068855
Hist2h2be	ENSMUSG00000068854
Hist2h3c2	ENSMUSG00000081058
Hist2h2aa2	ENSMUSG00000064220
Hist2h2aa1	ENSMUSG00000063954
Hist2h3c1	ENSMUSG00000093769
Hist2h4	ENSMUSG00000091405
Txnip	ENSMUSG00000038393
Gm16253	ENSMUSG00000087610
Polr3gl	ENSMUSG00000028104
Rbm8a	ENSMUSG00000038374
Pex11b	ENSMUSG00000028102
Pias3	ENSMUSG00000028101
Nudt17	ENSMUSG00000028100
Rnf115	ENSMUSG00000028098
Polr3c	ENSMUSG00000028099

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GLIS2	MA0736.1	chr3:96217705-96217719	CACCCCCCACAAAG	+	6.22
GLIS3	MA0737.1	chr3:96217705-96217719	CACCCCCCACAAAG	+	6.73
SOX10	MA0442.2	chr3:96217725-96217736	TTCTTTGTTTT	-	6.62
ZNF263	MA0528.1	chr3:96217584-96217605	TATTCTTCTTGCTCCTCCTCC	-	6.48
ZNF263	MA0528.1	chr3:96217587-96217608	TCTTCTTGCTCCTCCTCCTCG	-	6.61

Enhancer Sequence

AGCTGAGGAA CTGGTACAAA AATTATAACA GCCTTCTAAC CACCACCAAC TTCAATTTCC 60
TTGGCTTCGG TGATGTTGAG TTCCCACAGC TGTGCCTTGA GATCCGTGGT CATCTCCAGC 120
TCGAGCAGCG GCTGAGAGAT GCCAGGCTCG AACTCGTCAG GCTTGACGTT GGGTTTCAGA 180
ATCTTGGCAA GCTGGAGCTG AACATGGCTT CGTCCCTTGT AAGGAGTGCC GGCTTAGAAA 240
CTCCCCTAGT CTTTATAATA GTAATACTAA GAAATATGTT AGCTGCAAGG GGCCTGTTTC 300
AGGTGACTGA GTTGCTATAT GCATATAGCT CACAAACTTT TGTATGTACT TACTAAACAT 360
ACACTTCTTC ATCTCTTCAA TGTTTTTATG ACTAAAACCC AGAAAAGTAC TGAGGAAGTC 420
AAGGCACCGA GACACTCACA AACATAGTTA CCCCTGAGGA ACTGGTGGCC TGGGGACTGA 480
TACTCTTCCT TCCGTGGGCT CTCATATTCT TCTTGCTCCT CCTCCTCGTT TTTTGTTTAC 540
CACACAGTGT AGCTTTGTTT GTCTCCTTCA CAGATATCCC CCTTGCGGGC CTCCCAAGCA 600
CAGGGATTAA GATCGTTTGC TACCCCACCC CCCACAAAGC CTTTCTTCTT TGTTTTTGAC 660
ACATACTTTT CTGGTGTGGC CTACTCACTC TGCAGACCAG GAAGGCCTTG AACTCCAGAT 720
CCACCTGCCT ATCTCATTTT CTTTTCTGAA GATACCAGGT TCTGTGTGAC GCGAAGGTAG 780
GCAGGGGAAG ACACGCATCT TTAAACTTCT CAGCTTCAAT GTAATGTTTT GCATCCAAAG 840
ACAAAGAAAA GTGAACATTT TCATTAAAAA ACTACTAGAT TTTCTAATTG TTTACAAAAT 900
GTTCAACGCC CCCATATACA AAAGAAAAAA AAAATCTCCC ATACAATGGG AATACCAGTT 960
GATAGAGAAC TTAGGAAACT AGGTTCAATT CCCAGCACTA CACAAACCCA GTATGAAGAT 1020
CTACGCCTGT AGTCCTCCCA TCCCCACCCC CACCCCCAAG GACCACATGG CTGCATAGCT 1080
CGTTCAGGCA GAGCCAGCGA AACGCCTGCA AAATCTGCAC AACAGAAACA GGAGTATTAG 1140
ACAAAAGTGG AGGGGGACGG GGCGTGAGGG CGATATATAC CCTTTGGCTG GCTACCGTCT 1200
CACACCGAAG CCCCTTTCCC CAGAGTCGCA GGTTCTAGCG GCCCGCCCTG CAGCGGGGCA 1260
TTTCCCCAGC 1270